Gene Information

Name : Pput_0039 (Pput_0039)
Accession : YP_001265398.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 39826 - 41523 bp
Length : 1698 bp
Strand : -
Note : PFAM: sulfatase; protein of unknown function DUF1705

DNA sequence :
ATGACACCTTCCAAATCCATTGTTCACACCCTGTTAAGCAAATGGATCTTTGCTATTCGCAATGCGCGGCAGAAAGGCAT
CAGTACTAATTTGCTAATCGGCCTGGTGACTTTTTGGTTACTGCTATTCGCGAACGCTGAGCTCTGGAACGTGCTCTGGA
AGCTGGTATTCAAAACCGATGAAGTGAACTGGCAGCTAGCGGCTAGCCTCCCAGTCATAGTATTCGCATGGGTGTTTACC
GTTCTGAGCTTGCTGTCATGGGGGCGGCTGGCCAAACCCATACTGTGCCTGGTACTGATCAGCGCGTCTTTTGCGAGTTA
CTTCATGAATGCCTACGGCATCGTGATCGATTACACAATGTTCACCAACGTTGTGGAGACCGACGTCGCTGAGGCAACCG
AGCTGCTGAATTGGAAGCTCGGTCTTTGGGTCGCAATGGTTGGGGTGTTGCCCGTCTACCTGATTGCCCGGGTTCCCCTC
CGGCGCAAGCCTTGGGCCAAAGCTTTGGTCAGCAGGTTCATTGCTCTGTCGCTCGCTCTGTTGACCTTATCTGGCATCGC
GTTGAGTCAGTACCAGTCGTATGCCTCCTTGCTGCGCAACAATCGGGAGATCCGGCTGATTCTGGTACCTACCAACTTGT
TTGCGGCTGGCCATGGGTACCTGAAGCGTCAGCTGGCCTCACCTAAAACGCTGACGGCCATTGGTACTGATGCGGTAGTT
AATCGACAGGGTGCGGCTCGTAAACCCAGGCTGCTGGTACTGGCAGTAGGAGAGACCGCTCGCTCCGCCAACTTCTCCCT
CAACGGCTACTCCCGTGAAACGAATCCGGAACTAGAAAAGCGAAATGTCATTAGCTTCACGAACGTGAGCTCCTGCGGTA
CCGCTACCGCGGTCTCGCTGCCATGCATGTTCCTGGACGTGGGTAAGGCCCAGTACAAAGATGGCTTGGCCAAGAGCCGA
GAAGGGCTGCTCGACGTGCTTCAACGCGCTGGCATCAGTGTCATGTGGACTGACAACAACTCGGGGTGCAAAGGGGTCTG
CGACAGGGTTCCCAACCACAAGGCTGCCTCTCACGCGGATTCCCAACTGTGCACCAGCGAGGAGTGTAAGGACGGGGTGC
TGCTCACGGAGATGCAAGACTTCATCAAGCGCCAGGAAGGCGATGCTGTCCTGGTGCTCCACTACAAAGGCAGTCACGGC
CCGGCCTACTACAAGCGCTACCCCTCGCAATTCAAGAAATTCGCACCGGTGTGCGAGACCAACGAGCTCGACAAATGTAA
GCAGGAGGAGGTGGTCAATGCCTACGACAACTCAATCCTCTACACCGATTATGTGACTGCAAATCTCATCGATATCCTGG
CGGCCAACACCAAGTTCGACACTGCGCTGATGTACGTTTCGGACCACGGCGAATCGCTGGGGGAGGGTGGGCTCTATCTA
CACGGGCTGCCTTACGCGATGGCTCCTGACGAGCAAACAAAGGTGCCGTTGGTACTTTGGATGTCTGACTCGCTCGCGAA
GAGCGAAAAGGTCAACGTGGGTTGTTTGAAAGCTCAAACCACGTCACCGCTGAGCCACGACAACCTGTTCCACACCGTGC
TCGGCATGATGAACGTCCAGACGTCTTCGTATCGCTCAGCGCTGGATTTCACTGCCCCTTGTAAGCCCTTTGTCGGAGGC
TCTTATTCTGGCCTCTGA

Protein sequence :
MTPSKSIVHTLLSKWIFAIRNARQKGISTNLLIGLVTFWLLLFANAELWNVLWKLVFKTDEVNWQLAASLPVIVFAWVFT
VLSLLSWGRLAKPILCLVLISASFASYFMNAYGIVIDYTMFTNVVETDVAEATELLNWKLGLWVAMVGVLPVYLIARVPL
RRKPWAKALVSRFIALSLALLTLSGIALSQYQSYASLLRNNREIRLILVPTNLFAAGHGYLKRQLASPKTLTAIGTDAVV
NRQGAARKPRLLVLAVGETARSANFSLNGYSRETNPELEKRNVISFTNVSSCGTATAVSLPCMFLDVGKAQYKDGLAKSR
EGLLDVLQRAGISVMWTDNNSGCKGVCDRVPNHKAASHADSQLCTSEECKDGVLLTEMQDFIKRQEGDAVLVLHYKGSHG
PAYYKRYPSQFKKFAPVCETNELDKCKQEEVVNAYDNSILYTDYVTANLIDILAANTKFDTALMYVSDHGESLGEGGLYL
HGLPYAMAPDEQTKVPLVLWMSDSLAKSEKVNVGCLKAQTTSPLSHDNLFHTVLGMMNVQTSSYRSALDFTAPCKPFVGG
SYSGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 4e-96 41
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 4e-96 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_0039 YP_001265398.1 hypothetical protein BAC0485 Protein 2e-103 43