Gene Information

Name : Pput_3812 (Pput_3812)
Accession : YP_001269120.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 4275661 - 4276425 bp
Length : 765 bp
Strand : -
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence : 
ATGAGCCTGGAATTTACGGTAGTAATCCCCGCCCGACTGCGCTCCACCCGCCTGCCAGGCAAACCGCTGCTGCTGATTGC
CGGCAAGCCGATGGTGCAACATGTGTGGGAGCAGGCCCGCAAGAGCGGTGCCAGCCGTGTGGTCATCGCCACCGACGACA
CCAGCATCCTCGAAGCCTGCCAGGCCTTCGGTGCTGAAGTGCTGATGACCCGTGCCGATCATGAATCGGGCACTGACCGC
CTGGCCGAAGTGGCCGCGTACCTAGGGTTGCCGGCTGACGCCATTGTGGTCAACGTGCAGGGCGACGAGCCGCTGATCCC
GCCAGTGATCATCGACCAGGTGGCGGCCAACCTGGCTGCGCATCCGGAAGCCGGTATCGCCACCCTGGCCGAGCCGATCC
ATGAGCCGGAAACCGTGTTCAACCCGAACGCGGTCAAGGTGGTGAGTGACAAGAACGGCCTGGCCCTGACGTTCAGCCGA
GCGCCGCTGCCCTGGGCCCGCGATACCTTTGCCAAGGCCCGCGACGTGCTGCCGGAAGGGGTGCCCTATCGCCGTCATAT
TGGCATGTACGCCTACCGTGTCGGCTTCCTGCACGACTTCGTCAGCTGGGGCCCATGCTGGCTCGAGCAGGCTGAAGCGC
TGGAGCAGCTGCGTGCCCTGTGGCACGGCGTACGCATTCACATCGAGGATGCCATCGAGGCGCCTGCCGTGGGTGTCGAC
ACCCCTGAGGATCTGGAGCGCGTACGGCGCTTGCTGGAGGCCTGA

Protein sequence : 
MSLEFTVVIPARLRSTRLPGKPLLLIAGKPMVQHVWEQARKSGASRVVIATDDTSILEACQAFGAEVLMTRADHESGTDR
LAEVAAYLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSR
APLPWARDTFAKARDVLPEGVPYRRHIGMYAYRVGFLHDFVSWGPCWLEQAEALEQLRALWHGVRIHIEDAIEAPAVGVD
TPEDLERVRRLLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-38 45
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-38 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-38 45