|
Name : Pput_3752 (Pput_3752) Accession : YP_001269060.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : two component LuxR family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2197 EC number : - Position : 4204878 - 4205525 bp Length : 648 bp Strand : + Note : PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2 DNA sequence : ATGGAAAAACTCAAGGTCATCATCGCCGACGATCACCCCATCGTGCTGCTCGGCGTCCGGGAACTGGTCGAACGCGATCC ACGCTTTAGCGTGGTCGGCGAAGCCGTCTGTTCGCAAGGGCTGATCGAACTGCTCGAACGCCAACCCGTGGACATGGTCA TCTCCGACTACAACATGCCGGCAGACTCACCCTACGGTGACGGCCTGAAACTGATCGACTACCTCAAACGTCACTATCCC GCCGTCCGCATCCTCGTGCTGACGATGATTTCCAACCCGCTGATCCTGACACGGCTGCAGGAACTGGGCGTGGACGGCGT GATCCAGAAGAGCCAGTTGCATGGCGAAATCGAAAAGGCCCTCAATGCCGTCGCCCGCAACAGCACCTACCGGGCGCCGG CACCGGCAAGGCAGTCGGTGATCGCCTGTAACACCGCCATCGATCAACGGGTGGAAAACCTGTCACCCAAGGAATTCGAA ATACTGCGCCTGTTTGTTGCCGGACAAAGTGTCAGTGAGATCGCCCGTAGCCAACATCGAAGTACCAAGACCATTAGTGC GCAGAAAGTTTCCGCGATGCGCAAACTTGAAGTGAACAGCGATCAGGAATTGTTGGCCTATTGCCTGGCGAGTCATATCT TTAATTAA Protein sequence : MEKLKVIIADDHPIVLLGVRELVERDPRFSVVGEAVCSQGLIELLERQPVDMVISDYNMPADSPYGDGLKLIDYLKRHYP AVRILVLTMISNPLILTRLQELGVDGVIQKSQLHGEIEKALNAVARNSTYRAPAPARQSVIACNTAIDQRVENLSPKEFE ILRLFVAGQSVSEIARSQHRSTKTISAQKVSAMRKLEVNSDQELLAYCLASHIFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rcsB | AAP84166.1 | RcsB | Not tested | PAPI-1 | Protein | 2e-47 | 50 |
