Gene Information

Name : Pput_3584 (Pput_3584)
Accession : YP_001268892.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3998617 - 3999297 bp
Length : 681 bp
Strand : +
Note : TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein

DNA sequence : 
ATGAAACTGCTGATCGTCGAAGACCAGGCCCGCACCGGCCAGTACCTTAGCCAAGGCCTGAGCGAGGCCGGCTTTGCCAC
CGAATTGGCTACCGATGGCGAGACCGGCCAGTTCCTCGCCCTGACCGGCGACCACGACCTGCTGATCCTCGACGTGATGC
TGCCTGGCCGCGACGGCTGGCAGATTCTTCAGGCCGTGCGCCAGGCAGGCCTGGATACGCCAGTGCTGTTCCTGACCGCC
CGCGACGCCGTCGAGGATCGCGTGCATGGCCTGGAACTGGGCGCCGACGACTACCTGGTCAAGCCGTTCGCCTTTTCCGA
ACTGCTGGCCCGGGTACGCAGCCTGCTGCGCCGTGGCACCAGCCCGAGCCAGGACACGACCCTGAGCCTGGCCGACCTGC
GCCTGGACCTGATCCGACGCCGCGCCGAGCGCGCCGGGCTGCGCATCGACCTGACCGCAAAGGAATTCTCACTCCTTGAG
CTGCTGCTGCGCCGCCAGGGTGAGGTGCTGCCAAAATCGCTGATCGCCTCGCAGGTGTGGGACATGAACTTCGACAGCGA
CACCAATGTGATCGAAGTGGCCATCCGCCGCCTGCGCCTGAAAATCGACGACCCGCACCCCAACAAGCTGATCCACACCG
TACGCGGCATGGGTTACGTACTCGAAGAGCGCGCCGAGTGA

Protein sequence : 
MKLLIVEDQARTGQYLSQGLSEAGFATELATDGETGQFLALTGDHDLLILDVMLPGRDGWQILQAVRQAGLDTPVLFLTA
RDAVEDRVHGLELGADDYLVKPFAFSELLARVRSLLRRGTSPSQDTTLSLADLRLDLIRRRAERAGLRIDLTAKEFSLLE
LLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRLKIDDPHPNKLIHTVRGMGYVLEERAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-49 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-48 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator BAC0638 Protein 8e-57 70
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator BAC0083 Protein 1e-62 68
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator BAC0197 Protein 4e-58 65
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator BAC0111 Protein 2e-61 63
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator BAC0308 Protein 8e-59 62
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator BAC0347 Protein 3e-54 60
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator BAC0125 Protein 2e-57 58
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator NC_002516.2.879194.p Protein 2e-27 41
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator HE999704.1.gene1528. Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator VFG0596 Protein 2e-49 55
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator VFG1390 Protein 8e-34 44
Pput_3584 YP_001268892.1 two component heavy metal response transcriptional regulator VFG1389 Protein 3e-30 43