Gene Information

Name : Pput_3452 (Pput_3452)
Accession : YP_001268762.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3855404 - 3856090 bp
Length : 687 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGCCCCAGCATTCTCGTTGCGCAGAACCTTAGCAAAGTGGTCCCCAGCGCGGAAGGTGACCTTACCATCCTCCACGC
ACTGTCTCTCGACCTGGCCCAAGGCGATAGCCTGGCCATCGTCGGCGCCTCGGGCTCTGGCAAGTCGACCCTGCTCGGTT
TGCTCGCCGGCCTCGACCGCCCCAGCGCTGGCAATGTCGTGCTCGCCGGCCACGACCTGGGGCCACTGGATGAAGACCAA
CGCGCCCGTGTGCGCGCCGAACATGTGGGTTTCGTGTTCCAGTCGTTCCAGCTGCTCGACAGCCTCAATGCACTGGAAAA
CGTCATGCTGCCACTGGAGCTGGACGGCCGCCGCGATGCCCGCGAACAGGCTCGCACTTTGCTGGAGCGGGTCGGCCTGG
GCAAGCGCCTGAGCCACACACCTCGGCAGCTGTCGGGCGGCGAGCAGCAGCGCGTGGCAATCGCCCGCGCCTTCGCCGCG
CAGCCTGCGGTGCTGTTCGCCGATGAGCCCACCGGCAACCTCGACAGCCACACCGGCGAACGCATCAGCGACTTGTTGTT
CGAGCTGAACAAGGAGCGCGGCACTACCTTGGTGCTGGTCACCCATGACGAACGCCTGGCCCGCCGCTGCCGGCGCCAGA
TCCGCCTGGACGCGGGCCGCCTTGTGGCGCCGATGGAGGCCCGGTGA

Protein sequence : 
MSPSILVAQNLSKVVPSAEGDLTILHALSLDLAQGDSLAIVGASGSGKSTLLGLLAGLDRPSAGNVVLAGHDLGPLDEDQ
RARVRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRRDAREQARTLLERVGLGKRLSHTPRQLSGGEQQRVAIARAFAA
QPAVLFADEPTGNLDSHTGERISDLLFELNKERGTTLVLVTHDERLARRCRRQIRLDAGRLVAPMEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_3452 YP_001268762.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-30 51
Pput_3452 YP_001268762.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-32 47