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Name : Pput_2954 (Pput_2954) Accession : YP_001268266.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 3335610 - 3336965 bp Length : 1356 bp Strand : + Note : - DNA sequence : ATGAAAAACCTCGCGCTCGGGTTGGTGTGCTTCCTTGTGTCTACCGCAGGCCATGCCGCAGAGAACGGCTACCACCTCGG TGACCAAGCCCAGGTCCTGGATGACCGCGTGATGTACACCATCGGCGGCGGCTCCGCGGCAGGAGCGCCCTCCTCGCTTT ACCGTCCAAACGGCCTCGGCGTCGGCATGTCCTGGCGGGCCAACATGATGTGCGGAAACATGAACCTCTCGAACACCCTG CAGAACCAGCTCAATGGTGCCACCCAGGGCTTCCAGCAGATCATGGGCAACGTCATCCAGAACGCCACACAAGCGGTGAT GTCGCTGCCGGCGATGATCATCCAGCGCGCCAACCCTGGGCTGTATGAGCTGCTGAGTAATGGCGTGCTGCAGGGACGCA TCGACTTCGATCGTTCCAAGCTCACCTGCCAGGCGATGGCGGCAAAAATGGCCGACAAGGTCGACCAGGCCGGATGGGGT GCGCTGGCCCAGAACCAGGAGATGCAGCACAACCTTGAGCAGTCCGGCGGCGATGCCGTAATGGCGGTGAAGGATACCGA GTCGAACAACGGCAACAACGGCGTCAGCTGGGTCGGTGGGCAGAAAGCCGGGGGTAATGGACAGCAACCCATCCGGGTGA CTTCGGATGTGGTAAAGGCCGGCTACAACCTGCTGCACAACCGATCCGTCGAGGACACCTCGGCCGTTGGTTCGGGCTGC CAGAATGGCGCCATCTGCCAAGCCTGGTCGAGCCCCGAGGAGGCCTCGGAATGGGCGACACGGGTGCTCGGTGAAACTGA GGTGGAGACCTGTGACGACTGCGAGACGCTGCGTGTAACCGCCGGTACGGGCCTGTCGCCGCTGATCCAGGAAACCTACA CGGAACACCTGGAAGGCCTGCAGCACATGGTCTCGCGCGCCGACCAGCCTACCCCAGAGAACCTCAGCAAGGTCTCCAGC CCCTTGTTGCAGGTCTCCCGCGGCGTCATCGAGGGGCTGCGCGATGACCCCGACCAGAACTTGCTGGCCCGGCGCCTGGC CAGTGAGACCGCGCTGTCCAGCGTGATCTACAAGGCGATGCTGCTACAGCGCACGCTGTTCGCCGGCAGCCACGAACCGA ACGTGGCATCGGCGCAGCCCGCCACTACCGCCCTCAACAGCAACGTCGAAACCCTGGAACGGGAGATCCGCTTGCTGCAA ACCGAGCTGCAGGTACGCCAGTCGCTGGCCACTAATACCGCCAGCCTGGTCCTCGATCGCCACGCCGGTGGTGCCGACGC CTCGCGCAGCATCGATCAGCGCGACCCGATGCCGGACCGACTGCGCCGGGCTGAACAGGAGAGGAGCACGCCATGA Protein sequence : MKNLALGLVCFLVSTAGHAAENGYHLGDQAQVLDDRVMYTIGGGSAAGAPSSLYRPNGLGVGMSWRANMMCGNMNLSNTL QNQLNGATQGFQQIMGNVIQNATQAVMSLPAMIIQRANPGLYELLSNGVLQGRIDFDRSKLTCQAMAAKMADKVDQAGWG ALAQNQEMQHNLEQSGGDAVMAVKDTESNNGNNGVSWVGGQKAGGNGQQPIRVTSDVVKAGYNLLHNRSVEDTSAVGSGC QNGAICQAWSSPEEASEWATRVLGETEVETCDDCETLRVTAGTGLSPLIQETYTEHLEGLQHMVSRADQPTPENLSKVSS PLLQVSRGVIEGLRDDPDQNLLARRLASETALSSVIYKAMLLQRTLFAGSHEPNVASAQPATTALNSNVETLEREIRLLQ TELQVRQSLATNTASLVLDRHAGGADASRSIDQRDPMPDRLRRAEQERSTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C42 | AAN62135.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 8e-92 | 54 |
| unnamed | ABR13356.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 5e-91 | 53 |
| RL016 | AAP84143.1 | putative pathogenesis-related protein | Not tested | PAPI-1 | Protein | 6e-93 | 53 |
| EXA19 | ABD94628.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-93 | 53 |
| ORF SG50 | AAN62272.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 2e-90 | 52 |
| pph90 | CAI36131.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 3e-90 | 50 |
| STY4577 | NP_458662.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-58 | 41 |
| t4274 | NP_807872.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-58 | 41 |
| YE3466 | YP_001007627.1 | hypothetical protein | Not tested | YAPI | Protein | 3e-55 | 41 |
| YpsIP31758_3700 | YP_001402654.1 | hypothetical protein | Not tested | YAPI | Protein | 3e-55 | 41 |
| api55 | CAF28529.1 | putative exported protein | Not tested | YAPI | Protein | 2e-55 | 41 |
