|
Name : Pput_2953 (Pput_2953) Accession : YP_001268265.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 3334579 - 3335610 bp Length : 1032 bp Strand : + Note : PFAM: protein of unknown function DUF1527 DNA sequence : ATGCTGAAACTTGGCGCATGGATGCACACCGCTGCCACCTGCCGAGCGTTGCCCATGAACGTCACCGTCTTCACTCGAAG CAAAGCGCCGAAATCCAGAAAGGCTCGCCGTGGCCGTGCCTTCACCGCCACTGCTCTGCTGGTGGCCGCCGAGCAGTGCC TAGCATTGACCACTCCTACCGTCATCGCCTCCGTCACTTCGCTGCAGTGCCTGGAGTACCGGGTCGTCGGCATCTGCTAT TGGCTGCTGTGCACACCGTTCGGCTGCACGGTGCGAACCTCACCGAAGATCCGTCACTTCATTCCCGAGCTGGTGGTATC GAGCTATGCCGACACCGGCGCCAATCCCTGGAGCGAGATGTCGGCGCTGTCGACGCCGACGCCGGCGTCACAAGGGGGGG GCAACCTGATTACGCCTTCGCCGCAGCGCGATAACCTGCCCAGGTTCAAGAATGTCGACGGCATTGGCCATCCCGGCGGT GCAGCCCTCACAGCTCTCGCGCATACATTAGGTTATGCGTGCCCAAGCGGAGCCGTACCGTTTGCGCCCTACTACCTCAG CACGCTCGACCCGTTGGCGTGGCGCCAGGCGATCCCCGAGTCCGTCTACCCACAGGCACTGGTCCCGGGGATGCGCGAGA TCGGCAACCAGGCACTCGGAGACATGTGGGGCAGCGTGTATCCGCGACACGGCTTTCTGGTGCAGCCCGATGATTTCAAG GCGGCTGCCGTGATGGCCCAGCGCGCCAGCGACTTCATTACCCGTGTCGGCCAGCCGCACGTTTATCTACCGCTGCAGCC GATGCCGGCTCCCGGCTACTGGCCGCCGCAGCCGGTGATGGAGAACAACGTCAACAACCACCGCTGGCAGTTGCTGGTCC CGGTAATCCAGAACACCTGCGCCATCTTCCCCAGCCCAACGATCCAGAGCGCCGACGGCGCCTATGCCTGGTCGCTGTGG CGGCCCTACCGCTGCTGCCAGCGCATGGGTCAGACGTTTCTGTTCAGCATTGACTTTGATGGAGGCCAGTGA Protein sequence : MLKLGAWMHTAATCRALPMNVTVFTRSKAPKSRKARRGRAFTATALLVAAEQCLALTTPTVIASVTSLQCLEYRVVGICY WLLCTPFGCTVRTSPKIRHFIPELVVSSYADTGANPWSEMSALSTPTPASQGGGNLITPSPQRDNLPRFKNVDGIGHPGG AALTALAHTLGYACPSGAVPFAPYYLSTLDPLAWRQAIPESVYPQALVPGMREIGNQALGDMWGSVYPRHGFLVQPDDFK AAAVMAQRASDFITRVGQPHVYLPLQPMPAPGYWPPQPVMENNVNNHRWQLLVPVIQNTCAIFPSPTIQSADGAYAWSLW RPYRCCQRMGQTFLFSIDFDGGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph89 | CAI36130.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 3e-84 | 58 |
| RL017 | AAP84144.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 1e-79 | 56 |
| EXA20 | ABD94629.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 3e-80 | 56 |
| unnamed | ABR13357.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 3e-80 | 56 |
| ORF SG51 | AAN62273.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 6e-78 | 54 |
| ORF C43 | AAN62136.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 5e-77 | 53 |
| STY4576 | NP_458661.1 | hypothetical protein | Not tested | SPI-7 | Protein | 7e-74 | 50 |
| t4273 | NP_807871.1 | hypothetical protein | Not tested | SPI-7 | Protein | 7e-74 | 50 |
| Pmu_02990 | YP_005176198.1 | integrating conjugative element protein, PFL family | Not tested | ICEPmu1 | Protein | 1e-64 | 50 |
| api54 | CAF28528.1 | conserved hypothetical protein | Not tested | YAPI | Protein | 2e-71 | 49 |
| YpsIP31758_3701 | YP_001402655.1 | hypothetical protein | Not tested | YAPI | Protein | 2e-71 | 49 |
| YE3467 | YP_001007628.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-65 | 48 |
| PMI2573 | YP_002152292.1 | hypothetical protein | Not tested | Not named | Protein | 1e-61 | 48 |
| unnamed | AAX39458.1 | unknown | Not tested | Hrp PAI | Protein | 2e-54 | 45 |
