|
Name : Pput_2950 (Pput_2950) Accession : YP_001268262.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 3331462 - 3332736 bp Length : 1275 bp Strand : - Note : PFAM: UMUC domain protein DNA-repair protein DNA sequence : ATGCGCAGTGACCCGGTGTTCGCGCTCATTGATTGCAACAGCTTTTACGCAAGCTGTGAGCGCGTGTTCCGGCCGGATCT GGCCAAAACGCCGATTGTCGTACTGAGCAACAACGACGGCTGTGTGATCGCCAGGTCTTACGACGCTAAGCCCTACGTGA AGATGGGGGAGCCTTATTTTCAGGCGAAGGACAAGCTCAGTCGGCATGGCGTCGTGGCGTTCAGCAGCAACTACGCCTTG TACGGCGACATGAGCGAACGGGTTATGACGCTGATCGAATCAATGGTGCCGGCGACTGAGGTCTATAGCATCGATGAATG CTTCGCTGACCTCTCCGGCATTCCTGAAAACCTAACCGAGTTCGGGCGCAAGGTTCGATCGAGAATTTTCCAGTGCACGG GCATCCCGGTCGGTGTAGGTATCGCCAGCACAAAGACGCTCGCCAAGCTGGCTAACCATACGGCTAAACGCCTCCAGGCG CAGACCGGCGGAGTGGTGGACATCACTGTTCCGTTCAAGCGCGATTGGGTGCTGCGCAATACCGAGGTGAAAGAGGTGTG GGGCATTGGCCGGCGGATGACGGCTCACCTCGAGGCGATGGGCATCCGGACGGCCATGGACTTGGCCAAGGCCGACGCTT GGACACTTCGGCAGAAGTTCAGCGTCGTGGTGGAAAAGACTGCCCGCGAGCTGGCCGGCACGCCCTGCCTTGAACTTGAT GAGGTCGAACCGCCTAAACAAGAGATCTGCTGCAGCCGGATGTTTGGCAAGCGGCTAACCGAGCTGGCGCCAATTAAGCA AGCCGTGGCCACCTACGTCGGGCGAGCGGCGGAGAAGCTCCGCTCCCAAGGTTCGGTATGCAAGCGCATGCGCGTGAGCA TCCGCACGGGGATGTTCAATCCGGACGAGGCCCACCACGCCCAGGGCGCTCTGGTGGAGCTGCCGTACCCAACCTGCGAC ACGCTATTGATGACCAGATTGGCCACCGACGCAGTCGCGCGGGTCTTTCGGCAAGGGTTCCGGTACAGCAAAGCAGAGGT CCTGCTGATGGATCTGCGGCAGCCCGGCGAGTTTTCAGAGGATTTGTTTGCGCTCAAGCAGTCAGTTGCATGTGACCGGT TGATGCAGGTGATGGACGACATCAACGAGCGCTGGGGAAGGGGAACGATGCGCGCCGGTAGTGTACCGGTGGCGCCAGAG TGGGGGATGAGAAGGGAAATGATGAGCCAATCCTTTACGACCAGGATCGATCAGTTGTGGACGGTCAAATGCTGA Protein sequence : MRSDPVFALIDCNSFYASCERVFRPDLAKTPIVVLSNNDGCVIARSYDAKPYVKMGEPYFQAKDKLSRHGVVAFSSNYAL YGDMSERVMTLIESMVPATEVYSIDECFADLSGIPENLTEFGRKVRSRIFQCTGIPVGVGIASTKTLAKLANHTAKRLQA QTGGVVDITVPFKRDWVLRNTEVKEVWGIGRRMTAHLEAMGIRTAMDLAKADAWTLRQKFSVVVEKTARELAGTPCLELD EVEPPKQEICCSRMFGKRLTELAPIKQAVATYVGRAAEKLRSQGSVCKRMRVSIRTGMFNPDEAHHAQGALVELPYPTCD TLLMTRLATDAVARVFRQGFRYSKAEVLLMDLRQPGEFSEDLFALKQSVACDRLMQVMDDINERWGRGTMRAGSVPVAPE WGMRREMMSQSFTTRIDQLWTVKC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 8e-161 | 75 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 1e-120 | 68 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-77 | 45 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-77 | 45 |
