Gene Information

Name : Pput_2945 (Pput_2945)
Accession : YP_001268257.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3325706 - 3326512 bp
Length : 807 bp
Strand : +
Note : -

DNA sequence :
ATGATGCGAGTCTTGATCATGATGCTGGCGGTAGCCGCAGGCTGGTGTTCTGCAGTCGGTGCGGTCGAGGTCAAATACTG
GGATCGCCTGCCGCTGGCCGTTCCACTCACGGTGGGCCAAGAGCGCATCCTGATGCTGGATGAGGATGTTCGCGTGGGGG
TACCGGGCACGATCGCCGGCAAGCTGCGTGTGCAGTCCGTCGGCGGCACCGTGTATCTGCGCGCCGCGGAAGCCCTTCCC
CCTACCCGGCTGCAACTGCAGTCGGTGAAGTCAGGCGACATCATCCTGATCGACATCGAAGCGCTTGAGGGCAGTGAGGC
CCTGGAGCCGGTCAAGATCGTGGCCCAGGCTTCGGCACCGGACGTGGAAGCGGCGAAAGATGCAGCACCTGCCGCGACGC
CGGTACCGGTGGTGCTCACCCGCTATGCGGCGCAGAACCTCTATGCGCCCCTGCGCACCGTGGGACCGCTGCCCGGTGTG
CGACGGGTGCCGCTGAGCGACGCCGTTGCGTTCAGTTCGTTGCTGCCCACCGAGCGGGTCTCGATCAAGGCACTCGCCGC
CTGGCGGCTGGGCGACTACTGGGTGACCGCGGTGAAGATCGTGAACCGTGGCCCCGGCAAGATCACGCTTGACCCGCGTC
ACCTGCAGGCCACGCTGTACGCCGCAACCTTCCAGCACGCGGACCTCGGCCTTGCCGGTACGCCTGAAGACACCACCGTG
GCCTATCTCGTCACCCGCGGCGGCGACCTGAGGCATGCGCTGCTGTTGCCCCCGCCAAAGCCGGAGGCTGACGCTCATGA
AAGCTAA

Protein sequence :
MMRVLIMMLAVAAGWCSAVGAVEVKYWDRLPLAVPLTVGQERILMLDEDVRVGVPGTIAGKLRVQSVGGTVYLRAAEALP
PTRLQLQSVKSGDIILIDIEALEGSEALEPVKIVAQASAPDVEAAKDAAPAATPVPVVLTRYAAQNLYAPLRTVGPLPGV
RRVPLSDAVAFSSLLPTERVSIKALAAWRLGDYWVTAVKIVNRGPGKITLDPRHLQATLYAATFQHADLGLAGTPEDTTV
AYLVTRGGDLRHALLLPPPKPEADAHES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-45 53
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-50 52
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-45 51
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 8e-45 50
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 5e-45 50
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 3e-42 46
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 3e-42 46
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 3e-42 45
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 3e-42 44
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 1e-41 44
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 3e-42 44
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-42 42