|
Name : Pput_2904 (Pput_2904) Accession : YP_001268218.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 3295369 - 3296853 bp Length : 1485 bp Strand : - Note : PFAM: aldehyde dehydrogenase DNA sequence : ATGAGCGCTAGCTCGAAATTCAATGTGGATCCGGCCGGGTTCCGCAATCGTAATCTTATCGGCGGGCAGTGGAAGGGCTC GATTTCCGGCGAGACCATTACTGTCGAAAATCCCGCTACCGAGGAAATCATCGCCCATATTCCGCAGGGCCGACACGAAG ATATCGACGAAGCGGTACGGGTCGCGCGCGCTACATTCGAGTCGCCAGCCTGGCGGAAAATTCGTCCGATCGATCGTGGT CGGATCCTGGAGAACGTCGCACGCAAGATTGAAGAGCATGCTGACGAATTGGCGTATCTGGAGTCACTGGATACCGGCAA GGCCTTGACGTTCGCCAAGGCCATCGACCTGCCTTCGACAATCGACGTCTTCCGCTATATGGGTGGTTGGTGTTCCAAAC TTGGAGGGACGACCCCTCCAATTTCATTCGATGGGCGTGAATACCACACCTATACCCGACGTGAGCCGATTGGTGTAGTT GGTGCCATTACGCCTTGGAACTACCCGCTTGCGCTGGGCTCGTGGAAGATCGCTTCGGCGCTGGCTGCCGGCTGCACCAT GGTGCTGAAGCCCACAGAACTCACGCCTCTGAGCACTCTCCGGCTTGCAGAGCTGTGCCTTGAGGCGGGGCTGCCAGAAG GCGCGCTCAACATCGTCAATGGTCATGGGCACGAAGCGGGCGAAGCGTTGGCGCGTCATCCGGGGGTCGACAAGATCACC TTCACAGGCTCGACAGTAGTTGGCAAGAAGATTGTCGAGTACGCGCTGGGCAATATGAAGCGTGTCACCCTTGAGCTTGG CGGCAAATCGCCGAGCATCGTATTTGCCGACGCGGATCTGGACCAAGTCGGTCTGGGGGCTGCACTCGCAGTCTTCTTCA ACTCGGGACAGATCTGTTTCGCCGCCAGTCGGCTGTTCGTCCAGGACAGCGTGTATGACCAAGTGGTCGAAGCTGTGGCG GCGGCGGCGGCACAGTTCAAGGTCGGCAATGGCTTGGATCCGGACACTCTGTTGGGGCCGTTGGTGTCTCGCAAACAGCA AGAGCGGGTGATGGGCTATGTGCAGTCTGGGATAGAGCAGGGCGCAAGGCTGGTCTGTGGCGGGAAGTCAGTCGGAGAGA AAGGCTATTTCCTCCAGCCCACTGTTTTTGCCGACGCAGCCCCATCAATGCGGATCGCTCAAGAAGAGATTTTCGGGCCT GTAGTCAGTGTCATCCGATTTAAAGATGAAGCCGAGGCGATCCGGATGGCCAACGACACAGCTTATGGCTTGGCCGCCAA TATTTGGACGCGGGACATCAAGAAGGCCCACCGGGTCGCGCACCGCTTGCAGGCGGGTTCGGTGTGGATCAACTGTCACG GTGTGATCGATCCAGCTGCACCATTTGGAGGATTCAAGCAGTCAGGCTGGGGGCGCGAGGTCTCGGAGGAAGGGCTGTCT GCCTATACAGAGACTAAGACGGTCTGCGCACTACTCGATGACTGA Protein sequence : MSASSKFNVDPAGFRNRNLIGGQWKGSISGETITVENPATEEIIAHIPQGRHEDIDEAVRVARATFESPAWRKIRPIDRG RILENVARKIEEHADELAYLESLDTGKALTFAKAIDLPSTIDVFRYMGGWCSKLGGTTPPISFDGREYHTYTRREPIGVV GAITPWNYPLALGSWKIASALAAGCTMVLKPTELTPLSTLRLAELCLEAGLPEGALNIVNGHGHEAGEALARHPGVDKIT FTGSTVVGKKIVEYALGNMKRVTLELGGKSPSIVFADADLDQVGLGAALAVFFNSGQICFAASRLFVQDSVYDQVVEAVA AAAAQFKVGNGLDPDTLLGPLVSRKQQERVMGYVQSGIEQGARLVCGGKSVGEKGYFLQPTVFADAAPSMRIAQEEIFGP VVSVIRFKDEAEAIRMANDTAYGLAANIWTRDIKKAHRVAHRLQAGSVWINCHGVIDPAAPFGGFKQSGWGREVSEEGLS AYTETKTVCALLDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 7e-82 | 44 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-83 | 43 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 4e-83 | 43 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-86 | 43 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-86 | 43 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-86 | 43 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-86 | 43 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 9e-79 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pput_2904 | YP_001268218.1 | aldehyde dehydrogenase | VFG0082 | Protein | 9e-84 | 43 |
