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Name : Pput_0260 (Pput_0260) Accession : YP_001265618.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 301830 - 304154 bp Length : 2325 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold DNA sequence : ATGGACAGCATCAACAGCCGTATCGCCGAGGAACTGGGCGTACGCCCGCAGCAGGTCGAGGCGGCCGTGAGCCTGTTGGA CGAAGGCTCGACCGTGCCCTTCATCGCCCGCTACCGCAAGGAAGTGACCGGTAGCCTTGACGACACTCAGTTGCGCCACC TGGAAGAGCGCCTGCGCTACCTGCGCGAACTCGACGAGCGCCGCGCCAGCATCCTTTCCAGTATCGAGGAACAGGGCAAG CTGACCCCGGAACTGGCCCGCGAGATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTTTACCTGCCCTACAAGCA GAAACGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTCGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCC TGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGTCGAAAAGGGCGTGGCCGACGTCAAGGCCGCGCTGGAAGGCGCC AAATACATCCTGATGGAGCGCTTTGCCGAAGACGCCGCCCTGCTCGACAAGCTGCGCAGCTATCTCAAGCAGGAAGCCGT GCTCAGCGCCCGCGTCGTGGCTGGCAAGGAAGAAGAAGGCGCCAAGTTCCGCGACTACTTCGCTCATGACGAGCTGCTGC GCACGGCGCCATCGCACCGTGCCCTGGCGATCTTCCGCGGGCGCAACGAAGGCGTGTTGAGCGTCTCGCTGAAGGTCGGC GAAGAACTGCCCGGCACCCTGCACCCGTGCGAACTGATGATCGGCAACCACGTCGGCATCGAAAACCGCAGCCGACCCGC CGACAAGTGGCTGGGAGAAGTGGTGCGCTGGACCTGGAAGGTCAAGCTGTACACCCACCTGGAAACCGACCTGTTCGGCG AGCTGCGTGACAATGCCGAAGGCGAGGCGATCAACGTGTTCGCCCACAACCTGCACGATCTGCTGCTGGCCGCCCCGGCC GGTCCGCGCGCCACCCTGGGCTTCGACCCAGGCCTGCGTACGGGCTGCAAGATCGCCGTGGTCGACGCAACCGGCAAACT GCTGGACCACACCACGGTCTACCCGCACGCGCCGAAGAACGACTGGGACCGCACCATTTCCATCATGGCCGCACTGTGCG CCAAACACTCGGTGGAGCTGATCGCCATCGGCAACGGTACCGCCAGCCGCGAAAGCGACAAGCTGGTGGCCGAGCTGGTC AAGAAATATCCAGCCCTGAAAATCACCAAGATCATGGTCTCCGAAGCCGGTGCTTCGGTGTACTCGGCATCGGAACTGGC CGCCCGCGAGTTCCCGGACCTGGACGTGTCGATCCGCGGCGCCGTGTCGATCGCCCGCCGCCTGCAGGATCCGCTGGCCG AACTGGTGAAGATCGATCCGAAATCAATCGGTGTCGGCCAGTACCAGCACGACGTGTCCCAGCTGAAACTGGCACGTGGC CTGGACGCGGTGGTCGAGGACTGTGTGAACGCCGTGGGCGTGGACGTGAACACCGCTTCGGTGGCGCTGCTGACGCGCAT CTCCGGCCTCAATGCCACGCTGGCACAGAACATCGTCGCCCACCGCGATGCCAATGGTCCGTTTGCCACCCGTGCAGCGC TGAAAAAGGTTAGCCGCCTGGGTGAGAAAACCTTCGAGCAGGCCGCCGGCTTCCTGCGTGTGATGAACGGCGACAACCCG CTGGACGCCTCTGCGGTGCACCCTGAGGCTTACCCGCTGGTGCAGCGCATTGCTGCCGATACCGACCGCGACATCCGCTC GCTGATTGGTGACAGCAGCTTCCTCAAGCGCCTGGACCCGAAAAAGTTCACCGACGAAACCTTCGGCCTGCCAACTGTCA CCGACATCCTGCAAGAGCTGGACAAGCCCGGCCGCGACCCGCGTCCGGAGTTCAAGACCGCCACCTTCCAGGACGGCGTC GAAGACCTCAAGGACCTGGAACCGGGCATGATCCTCGAAGGCGTGGTGACCAACGTTACCAACTTCGGTGCCTTCGTCGA CATCGGCGTGCACCAGGACGGCCTGGTGCATATCTCGGCGCTGTCGGAGAAGTTCGTCAAAGACCCGCGTGAAGCGGTCA AGGCCGGCGATGTGGTCAAGGTCAAGGTCATGGAAGTGGACATCCCGCGCAAACGCGTCGGCCTGTCCATGCGCATGAGC GACACCCCGGGCGAGAAGGTCGAAGGCAACCGCGGTGGTAACCGCGGCAATGGTGGCAGCCGCCAGCAGCAGGCACCGCG CCAGCGTGAAACCGCCACGGCTGCGCCGGCCAACAACGCCATGGCCTCGCTGTTCGCCAACGCCAAGCAATTGAAGAAGA AGTAA Protein sequence : MDSINSRIAEELGVRPQQVEAAVSLLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRASILSSIEEQGK LTPELAREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADGLFNDPTLAPESEAARFVNVEKGVADVKAALEGA KYILMERFAEDAALLDKLRSYLKQEAVLSARVVAGKEEEGAKFRDYFAHDELLRTAPSHRALAIFRGRNEGVLSVSLKVG EELPGTLHPCELMIGNHVGIENRSRPADKWLGEVVRWTWKVKLYTHLETDLFGELRDNAEGEAINVFAHNLHDLLLAAPA GPRATLGFDPGLRTGCKIAVVDATGKLLDHTTVYPHAPKNDWDRTISIMAALCAKHSVELIAIGNGTASRESDKLVAELV KKYPALKITKIMVSEAGASVYSASELAAREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG LDAVVEDCVNAVGVDVNTASVALLTRISGLNATLAQNIVAHRDANGPFATRAALKKVSRLGEKTFEQAAGFLRVMNGDNP LDASAVHPEAYPLVQRIAADTDRDIRSLIGDSSFLKRLDPKKFTDETFGLPTVTDILQELDKPGRDPRPEFKTATFQDGV EDLKDLEPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS DTPGEKVEGNRGGNRGNGGSRQQQAPRQRETATAAPANNAMASLFANAKQLKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 63 |
