Gene Information

Name : Pput_2339 (Pput_2339)
Accession : YP_001267662.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2669818 - 2670243 bp
Length : 426 bp
Strand : -
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G

DNA sequence : 
ATGCAGCGCAGAACCAACCCGCAACGTGGCTTCACTCTGCTTGAACTCCTGGTGGTACTGGTAGTACTCGGCCTGCTGGC
CGGCATCGTCGCCCCCAAATACTTCAGTCAGCTAGGCCGCTCCGAGGCCAAGGTAGCGCGGGCGCAGATCGAGGGGCTGA
GCAAGGCCCTGGACTTGTACCGTCTGGAGGTCGGCCACTACCCCAACAGCGAACAAGGCTTGCAGGCGCTGGTGGTCGCG
CCCAGTGGCGAGGCTCGCTGGACCGGCCCGTACCTGCAGAAGGCCGTGCCGCAAGACCCGTGGGGCCGCCCTTATATCTA
CCGGCAACCTGGCGAGAACGGCGGTGAGTACGACCTGCTGTCGATGGGCAAGGACGGCCAGCCGGGTGGCGATGGCGAAA
ATGCCGAAGTTACCAGCTGGCAGTAA

Protein sequence : 
MQRRTNPQRGFTLLELLVVLVVLGLLAGIVAPKYFSQLGRSEAKVARAQIEGLSKALDLYRLEVGHYPNSEQGLQALVVA
PSGEARWTGPYLQKAVPQDPWGRPYIYRQPGENGGEYDLLSMGKDGQPGGDGENAEVTSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-19 43
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_2339 YP_001267662.1 general secretion pathway protein G VFG1871 Protein 2e-18 44
Pput_2339 YP_001267662.1 general secretion pathway protein G VFG0180 Protein 5e-19 43
Pput_2339 YP_001267662.1 general secretion pathway protein G VFG2050 Protein 1e-19 42