Gene Information

Name : Pput_2185 (Pput_2185)
Accession : YP_001267508.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2479540 - 2480040 bp
Length : 501 bp
Strand : +
Note : PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein

DNA sequence : 
ATGGCTCAAGTGACTCTCAAAGGCAACCCGGTCCAGGTCAACGGTAACCTGCCACAGGCCGGCGCCCAGGCTCCGGCTTT
CTCCCTGGTAGGTGAAGGCCTGGCTGACAAGTCGCTGAAAGACTACGCCGGCAAGCGCAAGGTGCTGAATATCTTCCCAA
GCGTCGATACCCCAACCTGCGCCACCTCGGTGCGCAAGTTCAACGCCCAGGCCAACGACGTTGCCAACACCGTGGTGCTG
TGCATCTCGGCTGACCTGCCGTTCGCCCAGGCACGTTTCTGCGGCGCCGAAGGGCTGGACAATGTGAAGAACCTGTCGAC
CCTGCGTGGCCGCGAGTTCCTCGAAAACTACGGCGTAGCCATCGCCGACGGCCCGCTGGCCGGCCTGGCCGCCCGCGCCG
TGGTGGTGCTGGACGAGAACGACAAGGTGCTGCACAGCGAACTGGTTGGCGAAATTGCTGACGAGCCGAACTACGACGCG
GCGCTGGCTGTACTGAAGTAA

Protein sequence : 
MAQVTLKGNPVQVNGNLPQAGAQAPAFSLVGEGLADKSLKDYAGKRKVLNIFPSVDTPTCATSVRKFNAQANDVANTVVL
CISADLPFAQARFCGAEGLDNVKNLSTLRGREFLENYGVAIADGPLAGLAARAVVVLDENDKVLHSELVGEIADEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 6e-30 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 4e-30 48
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 6e-30 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 4e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_2185 YP_001267508.1 redoxin domain-containing protein VFG0087 Protein 2e-30 48