Gene Information

Name : Pput_2127 (Pput_2127)
Accession : YP_001267450.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 2407780 - 2408283 bp
Length : 504 bp
Strand : -
Note : PFAM: uncharacterised conserved protein UCP028301

DNA sequence :
ATGTCTAAAAATACGGGATCCGTTGCGCCGAAAGAACGCGTCAATATCAAGTATGTGCCCGCTACCAGCGATGAGCAGGC
CGAGGTGGAGCTACCGCACAAGATGCTGGTGCTGGGCGACTTCGGCCTGGATGACAGCCGTGCGCTTGAGGACCGTCAGG
TCATGCGCATCGATAAACATACATTCAACAGCGTGTTGAACGACGCCAACGTAAGCCTGGACGTAACGGTACCGTCCAGG
CTTCGCACCGCCCCGGATACCGAGCTGGCCGTCCACCTGCAGTTCAGGTCCATCAACGATTTCGGGCCGGACCGGATCGC
GCGCCAGGTGCCCGAGCTGAACAAGCTGCTGGCGCTGCGCGAAGCACTGGTCGCCCTGAAAGGCCCGCTGGGCAACGTCC
CGGCCTTCCGCAAGCAATTGCAGCACCTGCTTAACAACGAGCAGGCGCGTAAGCAGCTCGCCCAAGAACTGGACCTGGTG
CTCGAGGCGCCAGAAAAAGATTGA

Protein sequence :
MSKNTGSVAPKERVNIKYVPATSDEQAEVELPHKMLVLGDFGLDDSRALEDRQVMRIDKHTFNSVLNDANVSLDVTVPSR
LRTAPDTELAVHLQFRSINDFGPDRIARQVPELNKLLALREALVALKGPLGNVPAFRKQLQHLLNNEQARKQLAQELDLV
LEAPEKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 6e-34 48
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-36 47
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 4e-36 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_2127 YP_001267450.1 hypothetical protein VFG2092 Protein 5e-43 56
Pput_2127 YP_001267450.1 hypothetical protein VFG2474 Protein 8e-34 50