Gene Information

Name : Pput_2126 (Pput_2126)
Accession : YP_001267449.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 2406272 - 2407762 bp
Length : 1491 bp
Strand : -
Note : PFAM: protein of unknown function DUF877

DNA sequence :
ATGCCCAAGCCAAGCAGCACCGCCATCACCACAGACGCAACGGCCGACACATTGAGCAATGCCACCCTGCTCGACCAGAT
CATGGCAGAAACCAAACTGGTACCTGCCCAGGAGGGCTACCAGATTGCCAGGCAGGGCGTATCTGCCTTCATCACCGAAA
TACTCAAAAGCAATGACCCAGATCAACTGATCAACAAGCACCGAGCCGACCAGATGATTGCCGAGATCGACCGAATGCTC
GGCAATCAGATGGATGCCATTCTGCATCAGCCTGAGTTCCAGCAGCTTGAATCATCATGGCGCAGCCTTAAACTTCTGGT
CGACCGCACGGACTTCAGGGAGAACATCAAGCTTGAAGTCTTGCATGTCACGAAAGAGGACCTGCTCGACGACTTCGAAA
ATGCTGCTGACATTACCTGCAGCGGTATCTACAAGCATGTTTACACCGCGGGTTATGGCCAATTCGGGGGAGAGCCGGTT
GCGGCCATGGTAGGCAACTACAACTTCGGCCCCTCTTCCCCTGACATCAAGTTGCTAAGTTACATGGCCTCCGTTGGCGC
CATGTCCCATGCCCCTTTTCTTGCTGCTCCTGCCCCCGAATTCTTCAATTTGAACAGCTTCGAGGAGCTGCCTAACCTCA
AGGAAATAAAAGACCTCTTCGCCGGCCCTCGGCATGCCAAGTGGCGCGCTTTTCGTGAAAGCGAAGACGCCCGCCACGTC
GCCCTGACCGGGCCGCGCTTCATGCTTCGCTCCGCTTACCACCCGCAGGAACAACCGATCGAGAGCTTCAACTACAACGA
AGACATCGCCGGGCAGCACGACAACTACCTGTGGGGCAATTCTGCTTTTCTGTTAGCCAGTTGCATCAACGACAGCTTCG
CCCGCTACCGCTGGTGCCCGAACATCATCGGCCCCCAATCCGGCGGTGCTGTCGAAGACTTGCCGGTCCACCTGTACGAA
TCCCTGGGCCAGTTGCAGGCCAAGATTCCTACCGAGGTGCTGATATCCGACCGCAAGGAATTCGAACTGGCCGAAGAGGG
CTTCATCGCCCTGACCATGCGCAAAGACAGCGACAACGCCGCGTTCTTCTCCGCCAACTCGGTACAAAAGCCCAAGCACT
TCCCGAAAACCCCTGAGGGGCTTCAGGCACAGACCAACTACAAGCTGGGTACCCAGTTGCCCTACCTGTTCATCGTCAAC
CGGCTCGCCCACTACATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGTTGGAAAGAGCGCCGTGACCTTGAGTCCGAGCT
GAACAAATGGATCAAGCAGTACGTCGCCGACCAGGAGAACCCGTCTGCCGACGTTCGCAGCCGCCGGCCGCTGCGTGCCG
CCCGTATTGAGGTCTCGGATGTTGCGGGTGACCCGGGCTGGTACCAGGTTTCGCTCGCCGTACGTCCGCACTTCAAGTAC
ATGGGCGCGAACTTCGAGATTTCCCTGGTCGGGCGGCTCGATACGCAATGA

Protein sequence :
MPKPSSTAITTDATADTLSNATLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDPDQLINKHRADQMIAEIDRML
GNQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEVLHVTKEDLLDDFENAADITCSGIYKHVYTAGYGQFGGEPV
AAMVGNYNFGPSSPDIKLLSYMASVGAMSHAPFLAAPAPEFFNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHV
ALTGPRFMLRSAYHPQEQPIESFNYNEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQSGGAVEDLPVHLYE
SLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKHFPKTPEGLQAQTNYKLGTQLPYLFIVN
RLAHYIKVLQREQIGSWKERRDLESELNKWIKQYVADQENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKY
MGANFEISLVGRLDTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-163 66
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 3e-163 66
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 5e-146 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_2126 YP_001267449.1 hypothetical protein VFG2093 Protein 4e-174 69
Pput_2126 YP_001267449.1 hypothetical protein VFG2475 Protein 2e-152 61
Pput_2126 YP_001267449.1 hypothetical protein VFG2070 Protein 2e-78 41