Gene Information

Name : Pput_2120 (Pput_2120)
Accession : YP_001267443.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 2400362 - 2401699 bp
Length : 1338 bp
Strand : -
Note : PFAM: protein of unknown function DUF876

DNA sequence :
ATGAGTTCACGCAATCCCGTTCTCTGGCCCGAAGGCCTGTTCGTCAAACCACAGCATTTCCAGCAGGCGACCAGGGCCAG
CGAAGCAGCCCTGCACCAGCGCCTCGCCAGCCTCAACGCAGCCTTCTACGGCTTCAGCGAACTTCAGTTGAGCGACGAAT
ACCTGAGCCTGGGCAAAGTCGCCATCACCCGGGCGCGCGGTGTGATGCCGGACGGCACGGTGTTCGACATTCCCGCCGAC
CTGCCGCCACCGCCGCCGCTGGAAATCGGCGACGACGCGTGCCAAGACAGTGAGGTGTATCTGTGCCTGCCGCTGCGTAC
CGATGGCGGCCGCGAAGTGAGTTGGCCCGACAATGCAGCCAATTTCCGCTATACCGCCCAGGCACAGGAAATCAAGGATA
CCCACACCGCTGACGGCGACCTGGTGCAGGTAGACCTTGCGGTGCCCAACCTGCAGCTCAAACGCAAGACCGAAGACAGC
AGCGCCTACACCCGCCTGGCCCTGGCACGTATTCTGGAACGGCGCCCCGACGGCAGCCTGCAACTGGACGAAGCGTTCTA
CCCCACCAGCGTTTCGGTGCGGGCGGTGCCAGCGCTGCAGCGGTTTCTTGAAGAAATCACCCATACCTTGCGCGAGCGGG
CGCGCGGCCTCGCCACGCGGATTGGTGCCTCGGGCCAGTCCGGGATCGCCGACATTCGCGACTTCAACCTGCTGCAGGCC
ATGAACCGTTGGTGGCCATGCTTCCAGCATCTGGCCAGGCAAGCGCAAACGCACCCCGAGCAGCTGTACCTGTGCATGAG
CCAGGCCTGCGGCGAATTCGTCACCTTCACCGACCAGAACAGGCTGCCGCAGGAGTACCCCGCCTATCACCACACCGCGC
TGCGCACCTCTTTCAAACCACTGGAAGACACCTTGCGTCGGTCTCTGAGCACCGTCTTGCGGCCACGCGCTGTTTCACTA
CCGCTGGAGAGCGAACAATTCGGCGTGATGACGACCACGCTGGAAGACCGCCGGCTGATCGACGAAGCCGACTTCATCCT
CGCCGTGCGCGCCAGCATGCCACCACAGGCGTTGCGCCAGATGTTCATCCAGAAAGCCAAGATCACCTCGCTTGAGTCAC
TGAATGACCTGGTGCCGCTGCAATTGCCGGGCATCCCTTTGTTGCCATTACCCGTGGCGCCCCGCGACCTGCCCTTCCAT
GCGGGCTTCAGCTACTTCGAGCTGGACCGACGAGACCCGGCCTGGGCGTGCATGAGCAAGGCGAATGGCTTCGGCATCCA
CATTGCGGGCGACTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGAGTGAGTGA

Protein sequence :
MSSRNPVLWPEGLFVKPQHFQQATRASEAALHQRLASLNAAFYGFSELQLSDEYLSLGKVAITRARGVMPDGTVFDIPAD
LPPPPPLEIGDDACQDSEVYLCLPLRTDGGREVSWPDNAANFRYTAQAQEIKDTHTADGDLVQVDLAVPNLQLKRKTEDS
SAYTRLALARILERRPDGSLQLDEAFYPTSVSVRAVPALQRFLEEITHTLRERARGLATRIGASGQSGIADIRDFNLLQA
MNRWWPCFQHLARQAQTHPEQLYLCMSQACGEFVTFTDQNRLPQEYPAYHHTALRTSFKPLEDTLRRSLSTVLRPRAVSL
PLESEQFGVMTTTLEDRRLIDEADFILAVRASMPPQALRQMFIQKAKITSLESLNDLVPLQLPGIPLLPLPVAPRDLPFH
AGFSYFELDRRDPAWACMSKANGFGIHIAGDFPGLELQFWAIRSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-65 41
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 2e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_2120 YP_001267443.1 hypothetical protein VFG2082 Protein 6e-100 49
Pput_2120 YP_001267443.1 hypothetical protein VFG2065 Protein 2e-76 45