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Name : Pput_2117 (Pput_2117) Accession : YP_001267440.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : Rhs element Vgr protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 2396601 - 2398769 bp Length : 2169 bp Strand : - Note : PFAM: Rhs element Vgr protein DNA sequence : ATGCCTAGCCAATCTGATTTACGCTACAGCTTTGAACCACTCGTGGGCAACACTGAGTTCGAAGTGGTGTCGTTCAAGCT CAAGGAGGCGCTCAGCCAACCGTTCACGTTGACCCTGGACCTCGTCAGCTTCGAACACGATGTCGACTTCGGCCACCTGC TCGACAAACCCGTGCTGTTCACCATCTGGGACGGTGGCCGCCCCGTACGCTACGTACATGGCCTGGTCAGCAGCTTCAGC CAGGGCGAGAGTGGCTTCTACCGCACTTACTACCACGTATTGGTCGAACCGCAACTGGCCCGCGCCAGGCTGCGCTCGAA CTGGCGCATCTTCCAGCACAAGACCGTGCCGCAAATTCTTGAACTGATGCTCAAGCGCCAGGGCATCGACCAGTACGAAC TACGCGCCAGCCTGGACCACCAAGTGCGCGAATTCTGCGTACAAGCCGGCGAAACCGACCTCGACTTCATCGCCCGCCTG ACAGCCGAAGAAGGCTTCGTCTACCGCTTCGAGCACAGTGAGAAACGCCATAAGCTGATCATCACCGACAGACTGCAGTT ACTCGGTCTGATAAGTCACGGTGCCATCAAACACGAGGACGACGCCGGAGGCTTCTACCGTGAGCGTGAACCGTCAGCCC CAGCCACCGTGCTGTACCATTCCAGCCACGGCGGCGACCAGCCTCAACCGTGCCTACGGCGCTTGCGCTACAGCGAACAG GTGCGTACTGCACGGCAGGTTCAACGCGACTACACCTTCACCCACCCGGCCTATCGTCAGGAACACAGGGCCTCGGGCCC GTATCTTGAGCACCAGTCCACGGACTATGAGTGCTTCGACTACCCCGGCCGTTACAAACGCGATGCCGTTGGCAAGCCGT TCACCGAAAACCGCATCACCGGCTTGCGCCATGACGTGCGTATTGCCCAAGTGCAAGGCGACGATGTGCGCTTGCAACCA GGCCTGACCTTCACCCTGACAGGCCACCCGCGCGAAGACCTGAATGTGCATTGGCGGGTCAGCACGGTTCGCCACGAAGG CAGCCAGTTCACCAGCCTGCAGGAAGAAGCTGCCGGGGCCGACCAGGGCACACGTTACGAGCAAAAGGCGGTACTGGTGC CAGGCAGAACCGAATGGCGCCCAGCCCCGTTGCCCAAACCACGCGTTGACGGCCCGCACATGGCCACCGTGGTGGGGCCG CCCGGTGAAGAGATCTACTGCGACGAATGGGGCCGGGTCAAGGTCAGCTTCCCCTGGGACAGAGAAAGCCAGGACAACGC GTTCAGTTCCTGCTGGGTACGCGTATCCCAAGGCTGGGCCGGCGGCAGCTGGGGCTCGATGGCCATCCCACGGATTGGCC AGGACGTGATCATCCACTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGCCGTACTTACTGCGGTAACCAGCTG CCACCGTACGACCTTCCCCGTCACAAGACCCGCATGACCATCAAGAGCCAGACCCACAAGGGCGATGGCTTCAACGAGCT GCGCTTCGAGGACGAACTGGGCCAGGAGGAAGTGTTCATTCATGCCCAGAGGGACCAGAACAATGTGGTCAAGCACGATG AGACTACGCAGGTCGGCAATGACCGCAAAGAGCAGGTCGATCACGACGAATCGATCCTGATCGGCCACGACCGTACGGAA ACGGTTGGCAATGACGAGCACATCACCATCGGGCAGGACGCCGCGCTCGACATCGGCAGAAACCACACGATCAGGATCGC CAAGGACCGTGTCGAAAACATCGGCAATCACCGTCACGACCAGATCGCCGCCAATCACCACACCCGTATCGGTGGCAACT TCGAACAACGGGTCGAAGGGCATGCCGAGCTGGAAGCCCGTGGGGATATCCGCAGACGTACTCGCCGTTATGAACTTCGA GCCTCGGAAGCCGTGGTCATCCAAGGCCCTGGTGGCTCCATTCGAATCGACGAAACGGGCATCACCCTGGACAGCCCGAC GATTCGCATCACCGGCCAGATGCTCAAGTCGGCAAATGGGACGACAAGCCCCTTTTCCATCAGCAGTGCACCGAACACCG GCAAGCCTCTGGAGCGCTTGTGTGGGCGCCGCCCTGATGGTACCTGCCCCCTGCCCGATTGCCGCTGTATCCGAGGGCCA GGCCAATGA Protein sequence : MPSQSDLRYSFEPLVGNTEFEVVSFKLKEALSQPFTLTLDLVSFEHDVDFGHLLDKPVLFTIWDGGRPVRYVHGLVSSFS QGESGFYRTYYHVLVEPQLARARLRSNWRIFQHKTVPQILELMLKRQGIDQYELRASLDHQVREFCVQAGETDLDFIARL TAEEGFVYRFEHSEKRHKLIITDRLQLLGLISHGAIKHEDDAGGFYREREPSAPATVLYHSSHGGDQPQPCLRRLRYSEQ VRTARQVQRDYTFTHPAYRQEHRASGPYLEHQSTDYECFDYPGRYKRDAVGKPFTENRITGLRHDVRIAQVQGDDVRLQP GLTFTLTGHPREDLNVHWRVSTVRHEGSQFTSLQEEAAGADQGTRYEQKAVLVPGRTEWRPAPLPKPRVDGPHMATVVGP PGEEIYCDEWGRVKVSFPWDRESQDNAFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIHYVNGDPDQPMITGRTYCGNQL PPYDLPRHKTRMTIKSQTHKGDGFNELRFEDELGQEEVFIHAQRDQNNVVKHDETTQVGNDRKEQVDHDESILIGHDRTE TVGNDEHITIGQDAALDIGRNHTIRIAKDRVENIGNHRHDQIAANHHTRIGGNFEQRVEGHAELEARGDIRRRTRRYELR ASEAVVIQGPGGSIRIDETGITLDSPTIRITGQMLKSANGTTSPFSISSAPNTGKPLERLCGRRPDGTCPLPDCRCIRGP GQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 3e-107 | 42 |
