Gene Information

Name : Pput_2028 (Pput_2028)
Accession : YP_001267352.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2292395 - 2293060 bp
Length : 666 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGCTAGCCATCGAACAACTCTACAAATCATTCCCCACCCCCCAAGGCCCGCTCCCCATATTGCAGGGGGTGGACATGCG
CCTGGCGCGGGGCAGCAGCCTGGCGCTGATGGGCGAGTCGGGCAGCGGCAAGAGCACTTTGCTGCACCTGGTGGCTGGCC
TGGACCGAGCGGACAGCGGCCGTATTCTGATCGACGATGTGCCGCTCGATGGCCGTTCGGAAGCGTCGCTGGCGCAGTGG
CGGCGGGAGGGGATTGGCCTGGTGTTTCAGCAGTACAACCTGATCAGCAGCCTGGACGTGGGCCTGAACCTTACGTTCCA
GGCCCGTCTCGCCGGGCGGCATGACCCGCAGTGGGCGGCTTACCTGGCGCAGCGCCTGGGCCTGGCGGACCTGCTTGAGC
GTTACCCGGAACAACTGTCTGGCGGCCAGCAGCAGCGGGTCGCCATCGGCCGTGCGCTTGCCGGGCGCCCGGCCTGGCTG
TTGGCTGACGAACCGACCGGCAGCCTCGATGAAGCCAGCAGTGACGAGGTGCTGAGTTTGTTGCTGCAGTTGGTCGCTGA
AGCCGGCAGCGGGGTACTGATGGTGACCCACAGTCCTCGGCTGGCGGCACGTTTGCAGCACCGTTGCTACCTGCAGGCCG
GCCGTGTGCGGCCCGAGCAGGGCTGA

Protein sequence :
MLAIEQLYKSFPTPQGPLPILQGVDMRLARGSSLALMGESGSGKSTLLHLVAGLDRADSGRILIDDVPLDGRSEASLAQW
RREGIGLVFQQYNLISSLDVGLNLTFQARLAGRHDPQWAAYLAQRLGLADLLERYPEQLSGGQQQRVAIGRALAGRPAWL
LADEPTGSLDEASSDEVLSLLLQLVAEAGSGVLMVTHSPRLAARLQHRCYLQAGRVRPEQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41