Gene Information

Name : Pput_1978 (Pput_1978)
Accession : YP_001267303.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4973
EC number : -
Position : 2243393 - 2244109 bp
Length : 717 bp
Strand : +
Note : PFAM: phage integrase family protein

DNA sequence :
TTGGAAGATGAATGGCGACTCCGTCGAGACGCGGCGCTTCTGCTTCGAGCGGTATTGCGCGATCTCTCTGGCCCTTGCCA
GTGCGCCAAGAGCCCGGCTGTTCAACATTACGGTGCGGGTGTATTTCGTCTTGGTCCGCTCGACTGCCTGCTTTTCAACC
ACGATCCGGCAGATGTGAGCCGTCTTTTTCTCGACGTAAGGCTCCAAATCGCGGAGGAAACTCGTGATTTAGCCCTTTTC
GATCTGGCCATCGATAGCAAACTACGAGCCTGCGATCTGACCAAGCTTCGCGTACGCGACGTTGCTCATGGGGAGCACGT
GTCATCGCGGGCGATAGTGATGCAGCAGAAAACCCAATGTCCCGTACAGTTTGAAATTACAGAGCAAATGCGGCTGGCCC
TACAGGCCTGGATACATCAAGCCCAACTCCACAGCGAGGATTGTCTTTTCCCAAGCCGGCTACACGCCTCAGTGCATCTC
TCCACCCGGCAGTACGCCCGAATCGTCAAAGCGTGGATAAAGTCTATTGGGCTAGATCCTGCTATGTACGGCACCCACAC
GATGAGACGTACAAAGGCATCGCTGATCTATCGCAGGACAAAGAACTTGAGAGCAGTTCAGCTCCTGCTCGGCCATACAA
AGCTTGAAAGCACGGTGCGATACCTGGGTATTGAAGTCGATGACGCATTGGAGATGGCAGAGCAGACGGAGGTCTGA

Protein sequence :
MEDEWRLRRDAALLLRAVLRDLSGPCQCAKSPAVQHYGAGVFRLGPLDCLLFNHDPADVSRLFLDVRLQIAEETRDLALF
DLAIDSKLRACDLTKLRVRDVAHGEHVSSRAIVMQQKTQCPVQFEITEQMRLALQAWIHQAQLHSEDCLFPSRLHASVHL
STRQYARIVKAWIKSIGLDPAMYGTHTMRRTKASLIYRRTKNLRAVQLLLGHTKLESTVRYLGIEVDDALEMAEQTEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67363.1 putative recombinase Not tested PAI II CFT073 Protein 6e-50 62