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Name : Pput_1833 (Pput_1833) Accession : YP_001267170.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2104854 - 2106134 bp Length : 1281 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATTCCAAACTGTTACGCGGCCAACTTCAGGAAGTGGCGGATCGCCTGGCCTCCCGTGGCTTCAGCCTGGATGT CGCGCGCATCGAATCACTGGAAGAGCGCCGCAAGGCGGTGCAGACCCGCACCGAACAGCTGCAGGCTGAGCGTAACGCCC GTTCCAAGTCCATCGGCCAGGCCAAGGCCAAGGGTGAAGACATCGCCCCGCTGATGGCGGACGTCGAGCGCATGGCCAAC GAACTGGCTGCCGGCAAGGCTGAGCTGGACGCCATTCAGGCCGAACTGGATAGCATCTTGCTGACCATTCCCAACCTGCC GGACGCCAGCGTGCCGGTCGGCGCCAGTGAAGACGACAACGTCGAAGTGCGCCGTTGGGGCACGCCGAAGGCGTTCGACT TCGAAATCAAGGACCATGTGGCCCTCGGTGAAATCAGCCGTGGCCTGGACTTCGAAGCGGCTGCCAAGCTGTCCGGTGCC CGTTTTGCTGTGCTGCGTGGTCCGGTTGCCCGTCTGCACCGCGCCCTGGCGCAGTTCATGATCAACCTGCACACCGGCGA ACATGGCTACGAGGAACACTACACCCCGTACATGGTGCAGGCGCCCGCGCTGCAGGGCACTGGCCAGTTGCCGAAGTTTG AGGAAGACCTGTTCAAGATCACCCGCGAAGGCGAGGCTGACTTCTACCTGATCCCGACCGCCGAAGTGTCGCTGACCAAC CTGGTGGCGGGTGAAATCCTCGACGCCAAGCAGCTGCCGCTCAAACTGGTTGCCCACACCCCTTGCTTCCGCAGCGAAGC CGGCGCTTCTGGCCGTGACACCCGCGGCATGATCCGCCAGCACCAGTTCGACAAAGTCGAGATGGTGCAGGTGGTAGAGC CGTCCAAGTCGATGGAAGCCCTGGAAGGCCTGACCGCCAATGCCGAGCGCGTGCTGCAGTTGCTTGAGTTGCCATACCGC GTGCTGGCCCTGTGCACTGGCGACATGGGCTTTGGTGCGGTGAAAACCTACGACCTGGAAGTGTGGGTGCCAAGCCAGGA CAAGTACCGCGAAATCAGCTCGTGCTCCAACTGTGGTGACTTCCAGGCGCGCCGCATGCAGGCTCGCTGGCGTAACCCGG AAACCGGCAAGCCAGAGCTGGTACACACGCTCAACGGCTCCGGTCTGGCCGTAGGCCGTACCCTGGTGGCTGTGCTGGAG AACTACCAGCAGGCCGACGGTTCGATCCTGGTGCCGGAAGTGCTGAAGCCTTACATGGGCGGCGTCGAGGTCATCCGCTA A Protein sequence : MLDSKLLRGQLQEVADRLASRGFSLDVARIESLEERRKAVQTRTEQLQAERNARSKSIGQAKAKGEDIAPLMADVERMAN ELAAGKAELDAIQAELDSILLTIPNLPDASVPVGASEDDNVEVRRWGTPKAFDFEIKDHVALGEISRGLDFEAAAKLSGA RFAVLRGPVARLHRALAQFMINLHTGEHGYEEHYTPYMVQAPALQGTGQLPKFEEDLFKITREGEADFYLIPTAEVSLTN LVAGEILDAKQLPLKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSKSMEALEGLTANAERVLQLLELPYR VLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSILVPEVLKPYMGGVEVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-107 | 55 |
