Gene Information

Name : Pput_1814 (Pput_1814)
Accession : YP_001267151.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0550
EC number : -
Position : 2082725 - 2084686 bp
Length : 1962 bp
Strand : -
Note : decatenates replicating daughter chromosomes

DNA sequence :
ATGCGCCTGTTCCTCTGTGAAAAACCCTCCCAGGCAAAAGACATTGCCAAAGTGCTCGGCGCCAACCGCAAAGGCGACGG
CTGCTGGCAAGGCACCGATATCTGCGTCACCTGGTGCATTGGCCACCTGCTGGAAACCGCCCCGCCCGACAGCTATGACG
AACGTTACAAGCGCTGGAACCTGGCCGACCTGCCGATCATTCCAGACAAGTGGAAGATGCTGGTAAAGCCCAAGACCGCC
AGCCAGTTCAAGGCGGTCAAACGTCTGCTCGGTGAAGCGCGGGAGCTGGTGATTGCCACCGACGCCGACCGCGAAGGCGA
AATGATTGCCCGCGAACTGGTCGAGCACTGCCGCTACCGAGGCCCGGTGCAGCGCCTGTGGCTGTCGGCGCTGGATGACG
CCTCCATCCGCAAGGCCCTGGCGCGCCTGCTGCCAGGCCACGAGACGTTCAACCTGTACCACTCGGCGCTGGGCCGCTCG
CGCGCCGACTGGCTGATCGGCATGAACATGAGCCGGCTGTTCACCTTGCTGGGCCGCCAATCCGGCTACCAGGGTGTGCT
GCCGGTAGGCCGCGTGCAAACGCCGACCTTGCGCCTGGTGGTCGACCGCGACCGCAGCATCGCCAACTTCGTGCCAGTGC
CGTTCTGGGCCATCGACGTACAGCTGGAACACGCCGGCCAACGCTTCAATGCCCAATGGCGCGCCCCCGAAGACGTCTGC
GATGACCAAGGCCGCTGCCTGAAGCAAGACCTGGCACAGCGGGCCGCCACCGACATCGGCCATGCCGGCACTGCCCGAGC
GGTAAAGGTAGCGACCGAGCGTGTGCGCGAAGCAGCACCGCTGCCCTTCGACCTTGGCACCCTGCAGGAGCTGTGCTCGA
AAAAGTTCGGCCTCGGCGCCCAGGAAACCCTCGACATTGCCCAGGCACTGTACGAAACACACAAGCTGATCACCTACCCG
CGCAGCGATTGCGGCTATTTGCCACAAAGCCAGCACGCCGAGGCACCCGCCATCCTCGCCGCCCTGCAACGGGCCGATGC
CAGCCTGGCACCGCTGCAGCCCTACCTGGAGCCGCAACGCCGCTCGCGGGCGTGGAACGACGCCAAAGTCAGCGCTCACC
ATGGCATCATCCCCACCGCCGCCGCCAGTGACCCCTCGCGCCTGCCGGCCAAGCACAAGGCCGTGTATACCCTGATCCGC
GCCCGCTATCTGGCGCAGTTCCTGCCCAACCATGAGTACGACCGCACCCAGGCCGACTTCGACTGCGCCGGTCATGCGCT
GCGTGCTGTGGGCAAGCAGATCGTCGAGCCGGGCTGGCGCCGCGCCTTGCCCGAGGCGCTCACCCCGGCCAAAGGCCGCG
AGGCACCACCGGCCCAGGTGCTGCCGGCGCTTCGCGAAGGCCAGGACTGCAACGTAAACGGCCTGCAACTGAAAGACCTG
TGGACCCAGCCACCCAAACCGTTTACCGAAGGCGACCTGATCAAGGCGATGAAAAACGTGGCCAAGCTGGTGGATGACCC
TCGGCTGAAGCAGAAACTCAAGGAAACCACCGGCATCGGCACCGAGGCCACCCGCGCCAGCATTATCCAGGGTCTGCTCG
ACCGCGGTTACCTGGTAAAGAACGGCAAGGCGCTGTCGGCCACACCTGCGGCCTTCAGCCTGATCGACGCCGTTCCCCGC
GCCATTGCCGATCCCGGCACCACGGCGATCTGGGAGCAGGCGCTGGACATGGTGCAAAGCGGCGAGATGACCCTGGAAGA
GTTCGTTGCCCGGCAGTCGGCGTGGATGGGCAAGCTGGTCGAGCGTTGCAGCGGCATGCGCATGACCATCAGCGGGCCAG
CGGCCGGGGCGGCCCCGCCCTGGAAGAAGAAACGTCGCGGTGGAGGTGGCAAAAGCAAAGCGGCCGGAAACAAGGCAACT
CCGAGCAAGCCACGGCAGCCGCGGAAAAAGGCAACGTCCTGA

Protein sequence :
MRLFLCEKPSQAKDIAKVLGANRKGDGCWQGTDICVTWCIGHLLETAPPDSYDERYKRWNLADLPIIPDKWKMLVKPKTA
SQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYRGPVQRLWLSALDDASIRKALARLLPGHETFNLYHSALGRS
RADWLIGMNMSRLFTLLGRQSGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPVPFWAIDVQLEHAGQRFNAQWRAPEDVC
DDQGRCLKQDLAQRAATDIGHAGTARAVKVATERVREAAPLPFDLGTLQELCSKKFGLGAQETLDIAQALYETHKLITYP
RSDCGYLPQSQHAEAPAILAALQRADASLAPLQPYLEPQRRSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIR
ARYLAQFLPNHEYDRTQADFDCAGHALRAVGKQIVEPGWRRALPEALTPAKGREAPPAQVLPALREGQDCNVNGLQLKDL
WTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLDRGYLVKNGKALSATPAAFSLIDAVPR
AIADPGTTAIWEQALDMVQSGEMTLEEFVARQSAWMGKLVERCSGMRMTISGPAAGAAPPWKKKRRGGGGKSKAAGNKAT
PSKPRQPRKKATS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB AAN62317.1 putative DNA topoisomerase III Not tested PAGI-3(SG) Protein 0.0 65
topB AAN62194.1 putative DNA topoisomerase III Not tested PAGI-2(C) Protein 0.0 63
pph56 CAI36097.1 Topoisomerase IA Not tested PPHGI-1 Protein 0.0 63
topB1 YP_005176228.1 DNA topoisomerase III Not tested ICEPmu1 Protein 2e-151 51
topB NP_458624.1 topoisomerase B Not tested SPI-7 Protein 2e-151 49
topB NP_807836.1 DNA topoisomerase III Not tested SPI-7 Protein 2e-151 49
topB AAF14809.1 topoisomerase B Not tested SPI-7 Protein 2e-151 49
PMI2630 YP_002152332.1 DNA topoisomerase III Not tested Not named Protein 2e-150 49
topB AAW83109.1 TopB Not tested GGI Protein 3e-119 43