Gene Information

Name : Pput_1765 (Pput_1765)
Accession : YP_001267105.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2018996 - 2019634 bp
Length : 639 bp
Strand : +
Note : PFAM: regulatory protein, LuxR; response regulator receiver

DNA sequence :
TTGATTAGGGTCTTAGTGGTCGATGATCACGATCTGGTACGAACCGGTATTACACGCATGTTGGCCGACATCGACGGCCT
GCAGGTGGTGGGTGAGGGAGATTCCGGCGAGTCGGCGCTGAAACTGGCCCGGGAGCTGAAACCGGACGTTGTGCTGATGG
ATGTGAAAATGCCCGGCATCGGCGGCCTGGAGGCCACCCGCAAGCTGCTGCGCAGCCACCCTGACATCAAGGTAGTGGCG
GTGACGGTGTGCGAGGAAGACCCGTTCCCCACACGCTTGTTGCAGGCCGGCGCTGCCGGCTACCTGACCAAGGGTGCAGG
CCTTGACGAAATGGTCCAGGCCATTCGTCTGGCCTTTGCCGGCCAGCGCTATATCAGCCCGCAGATCGCCCAGCAGTTGG
CGCTGAAACCGTTCCAGCCGCAGGGCTCGCCGTTCGACGCGCTGTCCGAGCGGGAAATCCAGATTGCCCTGATGATTGTC
GGCTGCCAGAAAGTGCAGATCATCTCCGACAAGTTGTGCCTCTCGCCCAAGACCGTCAATACTTACCGTTATCGGATCTT
TGAAAAACTCTCGGTCACCAGCGACGTCGAATTGACCTTGCTGGCCGTTCGCCACGGTATGGTTGACGCAAGCCTGTAA

Protein sequence :
MIRVLVVDDHDLVRTGITRMLADIDGLQVVGEGDSGESALKLARELKPDVVLMDVKMPGIGGLEATRKLLRSHPDIKVVA
VTVCEEDPFPTRLLQAGAAGYLTKGAGLDEMVQAIRLAFAGQRYISPQIAQQLALKPFQPQGSPFDALSEREIQIALMIV
GCQKVQIISDKLCLSPKTVNTYRYRIFEKLSVTSDVELTLLAVRHGMVDASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-50 55
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-50 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_1765 YP_001267105.1 two component LuxR family transcriptional regulator VFG1889 Protein 1e-49 54