Gene Information

Name : Pput_1638 (Pput_1638)
Accession : YP_001266978.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1841221 - 1841904 bp
Length : 684 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein

DNA sequence : 
ATGCACGTTCTGCTCTGCGAGGACGACGACCTGATCGCCGCCGGCATCTGCGCCGGCCTCACCGCTCAGGGTCTGACCGT
GGACCGGGTTGGCAACGCCGCCGCTGCGCGAGCGATGCTGCAGGCCGCGCAGTTCGACGTGATGATCCTCGACCTCGGCC
TGCCCGACGAAGATGGCCTCAAGCTGCTGCGCCGCCTGCGCGAAAAAGGCGAGACCCTGCCGGTACTGGTGCTCACCGCC
CGCGATGCCGTCACCGATCGTGTCGATGGCCTGCAGGCCGGTGCCGACGATTACCTGCTCAAGCCCTTCGATCTGCGCGA
GCTGGCCGCACGCCTGCATACCTTGCTGCGGCGGGTGGCCGGGCGGGCGGTGAACGTGATCGAGCACGGCCCGCTGCGCT
ATGACCCGAGTAGCTGCGAGGCGACCCTGGCCGGCCAGCATGTCGACCTGTCCCGCCGTGAGCAGGCCCTGCTCCAGGCG
CTGCTGCAGAACCCCGGGCGAGTGCTGTCCAGCGAGCAACTAAAGGACTGCGTATACGGTTTCAGCGACGAGGTCGAGAG
CAACGCCCTGAATGTGCACATCCACCACCTGCGTCGCAAGCTGGGTAACGGCATTGTCGAGACCGTGCGTGGCCTGGGCT
ACCGGCTGGGCCCGGCGCAGGCACCGCAAGAGGCCGCATCATGA

Protein sequence : 
MHVLLCEDDDLIAAGICAGLTAQGLTVDRVGNAAAARAMLQAAQFDVMILDLGLPDEDGLKLLRRLREKGETLPVLVLTA
RDAVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRAVNVIEHGPLRYDPSSCEATLAGQHVDLSRREQALLQA
LLQNPGRVLSSEQLKDCVYGFSDEVESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPAQAPQEAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-48 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_1638 YP_001266978.1 two component transcriptional regulator BAC0487 Protein 7e-26 43
Pput_1638 YP_001266978.1 two component transcriptional regulator CP000647.1.gene1136. Protein 9e-20 41
Pput_1638 YP_001266978.1 two component transcriptional regulator BAC0530 Protein 1e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_1638 YP_001266978.1 two component transcriptional regulator VFG1389 Protein 2e-21 44
Pput_1638 YP_001266978.1 two component transcriptional regulator VFG0473 Protein 2e-30 43