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Name : fliP (Pput_1511) Accession : YP_001266852.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 1695849 - 1696604 bp Length : 756 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAGCGGCGCGCTGCGTACGTTGTTGACTCTGGCGCTGCTGCTGGCTGCGCCGCTGGCCCTGGCCGCCGACCCGCTGTC GATTCCGGCCATCACCCTGTCCAACACCCCGGACGGGCAACAGGAATATTCGGTCAGCCTGCAAATCCTGCTGATCATGA CCGCGCTGAGTTTCATCCCGGCGTTCGTCATTCTGATGACCAGCTTTACCCGCATCATCATCGTGTTTTCGATCTTGCGC CAGGCCCTGGGCCTGCAGCAGACGCCCTCGAACCAGTTGCTCAACGGCATGGCGCTTTTCCTGACCATGTTCATCATGGC CCCGGTGTTCGAGCGAGTGAACCAGGATGCCCTGCAGCCGTACCTGAAGGAGCAGATGACTGCCCAGCAGGCGATCGACA AAGCCCAGGGCCCGCTCAAGGACTTCATGCTGGCGCAAACCCGGCAGAGCGACCTTGACTTGTTCATGCGCCTGTCCAAG CGCACCGACATCGCCGGCCCCGACCAGGTGCCGCTGACGATCCTGGTGCCGGCATTCGTCACGTCGGAGCTCAAGACCGC GTTCCAGATCGGGTTCATGATCTTCATCCCGTTCCTGATCATCGACATGGTCGTGGCCAGTGTGCTGATGGCCATGGGTA TGATGATGCTGTCGCCGCTGATCATCTCGCTGCCGTTCAAGATCATGCTGTTCGTGCTGGTCGACGGCTGGGCGCTGATC ATGGGCACCCTGGCCAGCAGTTTCGGCGGCGTCTGA Protein sequence : MSGALRTLLTLALLLAAPLALAADPLSIPAITLSNTPDGQQEYSVSLQILLIMTALSFIPAFVILMTSFTRIIIVFSILR QALGLQQTPSNQLLNGMALFLTMFIMAPVFERVNQDALQPYLKEQMTAQQAIDKAQGPLKDFMLAQTRQSDLDLFMRLSK RTDIAGPDQVPLTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSPLIISLPFKIMLFVLVDGWALI MGTLASSFGGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 8e-32 | 42 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 9e-33 | 41 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 9e-30 | 41 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 9e-30 | 41 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 9e-30 | 41 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 2e-32 | 41 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 6e-33 | 41 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-32 | 41 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 9e-33 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 7e-23 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 6e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001266852.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 3e-89 | 83 |
| fliP | YP_001266852.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 1e-66 | 61 |
| fliP | YP_001266852.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 3e-65 | 60 |
| fliP | YP_001266852.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 1e-61 | 59 |
| fliP | YP_001266852.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 4e-33 | 41 |
| fliP | YP_001266852.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 1e-34 | 41 |
| fliP | YP_001266852.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 1e-34 | 41 |
| fliP | YP_001266852.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 7e-33 | 41 |
