Gene Information

Name : Pput_1090 (Pput_1090)
Accession : YP_001266435.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 1229331 - 1229765 bp
Length : 435 bp
Strand : +
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G

DNA sequence : 
ATGCAGCATCGACGTAACCGCCAACGCGGCTTCACCCTCATGGAGATCATGGTGGTGATCTTCATCATCGGCCTGCTGAT
CGCCGTGGTGGCGCCCAGCGTGCTGGGCAACCAGGACAAGGCCATGAAGCAGAAGGTGATGGCCGACCTGGCCACCCTGG
AGCAGGCGCTGGACATGTACCGGCTGGACAACCTGCGCTTCCCCAGCAGCGAACAGGGCCTGGCCGCGCTGGTGAAAAAG
CCGGCTCAGGAGCCAGTGCCTCGGGCCTGGCGCAGTGATGGCTACGTACGTCGCCTGCCGGAGGACCCGTGGGGCACCCC
GTACCAGTACCGCATGCCCGGCGAGCATGGCCGGGTCGATGTGTACTCGCTGGGTGCCGATGGCCTGCCGGGCGGCGAAG
GCCAGGATGCCGACCTGGGTAACTGGGCGCTGTAA

Protein sequence : 
MQHRRNRQRGFTLMEIMVVIFIIGLLIAVVAPSVLGNQDKAMKQKVMADLATLEQALDMYRLDNLRFPSSEQGLAALVKK
PAQEPVPRAWRSDGYVRRLPEDPWGTPYQYRMPGEHGRVDVYSLGADGLPGGEGQDADLGNWAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-37 55
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-38 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_1090 YP_001266435.1 general secretion pathway protein G VFG2050 Protein 3e-38 55
Pput_1090 YP_001266435.1 general secretion pathway protein G VFG0180 Protein 2e-36 54
Pput_1090 YP_001266435.1 general secretion pathway protein G VFG1871 Protein 6e-34 50