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Name : Pput_1089 (Pput_1089) Accession : YP_001266434.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 1228111 - 1229313 bp Length : 1203 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein DNA sequence : ATGCCGACCTATCGCTACCAGGCCGTTGACCTCGCCGGCAAATCGCACAAGGCCAGCCTGCAGGCTGACAGTGAACGCCA CGCCCGCCAGCTGCTGCGCGAGCAGGGCCTGTTCGCCCGCCAGTTGCAGCGCCATGAAGCCGGCAGCCGACAACCCCGAC GCCAGCGCTTGAGCCGCGCCCAGTTGTGTGAGCTGACCCGTCAGCTGGCCACCTTGACCGGGGCCGGCATTCCCTTGGTC GATGCCCTTGCCACCCTTGAACGGCAACTGCGTCAACCCGCCTTGCACAGTGTGCTGGTGGCCTTGCGCGGCTCACTGGC CGAAGGCCTGGGCCTGGCCCGCAGCCTGGCCCGGCAGGGCGCACCGTTTACTGGCCTGTACTGCGCGCTGGTCGAGGCCG GCGAACGTTCCGGGCACCTGGCCCAGGTGCTGACCCGCTTGGCCGACCACCTGGAGCAGGTGCAACGCCAGCAACACAAG GCCCGCACAGCGCTGATCTACCCCGCTGTGCTGATGGGTGTGTCGCTGGCAGTGGTGATTGGCCTGATGACGTTCGTCGT GCCCAAACTCACCGAGCAATTTGCCCACGCCGGGCAAAGCCTGCCGCTGATCACCTCGTTGCTGATCGGCCTGAGCCAGG GGCTGGTGCACGCCGGGCCCTGGTTGTTAGGGGGGGCGCTGTTGCTCGGGGGGCTGGCTGGCTGGCTGCTGCGCAAACCG CACTGGTGCCTGCGTCGCGACCAGCTGCTGCTGCGCCTGCCGCGTATTGGCAGCCTGCTGCAGGTGCTGGAGAGCGCGCG CCTGGCGCGCAGCCTGGCGATTCTCACTGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCG GCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGAT GCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTCGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGA GCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAACCCCTGATGATCC TGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAATTG TGA Protein sequence : MPTYRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQLQRHEAGSRQPRRQRLSRAQLCELTRQLATLTGAGIPLV DALATLERQLRQPALHSVLVALRGSLAEGLGLARSLARQGAPFTGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHK ARTALIYPAVLMGVSLAVVIGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPWLLGGALLLGGLAGWLLRKP HWCLRRDQLLLRLPRIGSLLQVLESARLARSLAILTGSGVALLEALQVATETIGNRRIRLAMEQVRQHVQGGTSLHRALD ASQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQGLQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 4e-51 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-50 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pput_1089 | YP_001266434.1 | general secretion pathway protein F | VFG0181 | Protein | 8e-54 | 42 |
| Pput_1089 | YP_001266434.1 | general secretion pathway protein F | VFG2049 | Protein | 2e-49 | 41 |
