|
Name : Swit_0844 (Swit_0844) Accession : YP_001261349.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 941649 - 942647 bp Length : 999 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain DNA sequence : ATGGCGATTCTCATAACCGGCGCCGCCGGCTTCATCGGCATGCATTGTTCGCTGCGCCTGCTCGCCCGCGGGGACAGCGT CGTCGGGATCGACAATCTCAACGATTATTACCCGGTCCAGCTCAAGCGCGACCGGGTCGCCAGGGTCGCGACCGAGGGCG GCGACCGCTATCGCTTCATCCCGTGCGACTTCGCCGATCATGCGGCGCTGGAGGCGGCGCTCGCGGGGCTGGAGATCGAC CGGATCATCCATCTCGGCGCGCAGGCCGGGGTCCGCTACTCGATCGAGAATCCGCGCGCCTATGCGCAGAGCAACCTCGT CGGCCACCTCAACATCCTCGAGCTGGCGCGCGAGCGCCGGGCCGGGCATCTCGTCTACGCCTCCTCCTCTTCGGTCTATG GCGGCAACGAGACGCTGCCCTTCCGGGTCGAGGACCGGGTCGATCATCCGCTGTCGCTCTATGCCGCCACCAAGAAGGCG GACGAGCTGATGAGCGAGACCTATGCCCATCTCTATCGCCTGCCGCAGACCGGCCTGCGCTTCTTCACCGTCTATGGCCC CTGGGGACGTCCCGACATGGCGCTGTGGCTGTTCACCGACGCGATCCTGCGGGGGCGGCCGATCCAGGTGTTCAACGGCG GCGAGATGCGGCGCGACTTCACCTATATCGACGACATCGTCACCGGCGTCGTCGCGGCGCTCGACCATCCGCCGGCCGAC GACGGGCAGGCGAAGGCGGGCGGCAGCGTCTCGCCCCACGCCGTCTACAATATCGGCAATCATCGGTCGGAGGAGCTGAC CCGGCTGATCGACCTGATCGAGGCGGCGTGCGGCCGCCCGGCGATCCGCGAGATGAAGCCGATGCAGCCCGGCGACGTGC GCGAGACCTTCGCCGACATCGGCGCGATCGAGCGCGACCTGGGCTTCCGCCCGACCACCGACATCAGCGACGGCGTTCCC CGCTTCGTCGACTGGTTTCGCGACTATCATGGGATATGA Protein sequence : MAILITGAAGFIGMHCSLRLLARGDSVVGIDNLNDYYPVQLKRDRVARVATEGGDRYRFIPCDFADHAALEAALAGLEID RIIHLGAQAGVRYSIENPRAYAQSNLVGHLNILELARERRAGHLVYASSSSVYGGNETLPFRVEDRVDHPLSLYAATKKA DELMSETYAHLYRLPQTGLRFFTVYGPWGRPDMALWLFTDAILRGRPIQVFNGGEMRRDFTYIDDIVTGVVAALDHPPAD DGQAKAGGSVSPHAVYNIGNHRSEELTRLIDLIEAACGRPAIREMKPMQPGDVRETFADIGAIERDLGFRPTTDISDGVP RFVDWFRDYHGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-77 | 49 |
