Gene Information

Name : Swit_0635 (Swit_0635)
Accession : YP_001261141.1
Strain : Sphingomonas wittichii RW1
Genome accession: NC_009511
Putative virulence/resistance : Unknown
Product : TraR/DksA family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 688589 - 689056 bp
Length : 468 bp
Strand : -
Note : TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type

DNA sequence :
ATGGCATCGTCGCTGAGTGGGCGTATGGATGGTCGGGAACCGGTGAACGTGTCTACGGTGGAACTGGACGACGGATACAG
GCCTTCGCCTGACGAGCCCTTCATGAACGATCGGCAGCTCGCCTATTTCAAGGCGAAGCTCCTCCTCTGGAAGGACTCCA
TCCTCAAGGAGTCGGCGGGAACGCTGCAACAGCTCCAGATCGATTCGCTGCGCGAGCCCGACCTCACCGACCGCGCGTCG
AGCGAGACGGACTGGTCGATCGAACTGCGGACCCGCGATCGCCAGCGCAAGCTGATCTCCAAGATCGACGCCGCGCTGCG
CCGGATCGAGGAAGGCGAATATGGCTATTGCGAAGTGACCGGCGAGCCGATCTCGCTGGGCCGCCTCGAAGCCCGCCCGA
TCGCGACGATGACGGTCGAAGCCCAGGAGCGCCACGAGCGCAACGAGAAGGTCAGCCGGGAAGAATAG

Protein sequence :
MASSLSGRMDGREPVNVSTVELDDGYRPSPDEPFMNDRQLAYFKAKLLLWKDSILKESAGTLQQLQIDSLREPDLTDRAS
SETDWSIELRTRDRQRKLISKIDAALRRIEEGEYGYCEVTGEPISLGRLEARPIATMTVEAQERHERNEKVSREE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00314 YP_008207779.1 DnaK suppressor protein Not tested AbaR25 Protein 6e-24 44
BJAB0868_00318 YP_008211644.1 DnaK suppressor protein Not tested AbaR26 Protein 6e-24 44