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Name : rph (Swit_0567) Accession : YP_001261073.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 618733 - 619449 bp Length : 717 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGCCCATCCGGCCGCGCCCCCGATCAGATGCGGGCGATCAGCATCGAAACCGGTTTCACCGTCCACGCCGAAGGCTC CGTGCTGATCAGCTTCGGCGACACCCGCGTCCTCGTCACCGCCTCGGTCGAGGAGAAGGTTCCGCCCTTCCTGCGCGGCA AGGGCCAGGGCTGGGTCACCGCCGAATATGGCATGCTGCCCCGCGCCACCCATACCCGCGGCAGCCGCGAGGCGGCCAAG GGCAAGCAGTCCGGCCGCACCCAGGAGATCCAGCGCCTGATCGGCCGCTCGCTCCGCGCGGTGGTCGACATGGCGAAGCT CGGCGAGCGCCAGATCGTGATCGACTGCGACGTGCTCCAGGCCGACGGCGGCACCCGCACCGCCTCGATCTCGGGCGGCT GGGTGGCCCTGCGCCTCGCGGTCGACAAGCTGCTCGCCTCGGGCGCGATCGCCGAGGACCCGATCACCGCGCAGGTCGCG GCGATCTCCTGCGGCATCCATGAGGGAACGCCGGTGCTCGACCTCGACTATATCGAGGATTCGAACGCCCATGCCGACGC CAATTTCGTGCTGCTCGACAATGGCAACATCGCCGAGGCGCAGGCGACCGCGGAAGGAGCGACCTATGACGAGGAAGCCT TGCTGAGGCTGCTCCGCCTCGCCCGCATCGGCTGCGGCGAGATCTTCGCCGCGCAGCGCAAGGCGACCGGACGGTGA Protein sequence : MRPSGRAPDQMRAISIETGFTVHAEGSVLISFGDTRVLVTASVEEKVPPFLRGKGQGWVTAEYGMLPRATHTRGSREAAK GKQSGRTQEIQRLIGRSLRAVVDMAKLGERQIVIDCDVLQADGGTRTASISGGWVALRLAVDKLLASGAIAEDPITAQVA AISCGIHEGTPVLDLDYIEDSNAHADANFVLLDNGNIAEAQATAEGATYDEEALLRLLRLARIGCGEIFAAQRKATGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 3e-49 | 55 |
