Gene Information

Name : Swit_4338 (Swit_4338)
Accession : YP_001264816.1
Strain : Sphingomonas wittichii RW1
Genome accession: NC_009511
Putative virulence/resistance : Unknown
Product : 3-oxoacid CoA-transferase subunit A
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : 2.8.3.5
Position : 4783770 - 4784447 bp
Length : 678 bp
Strand : -
Note : TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase

DNA sequence :
ATGATCGACAAGGGATTTGCCAGTATCGACCAGGCGGTCGCGGACATCTTCGACGGGGCGTCGGTGATGGTCGGCGGCTT
CGGCACCGCCGGCATGCCCGACGAGCTGATCGACGCGCTGATCGCCCGCAACGTCGGCGGGCTGACGATCATCAGCAACA
ATGCCGGCAATGGCGAGACGGGCCTCGCGGCGCTGATCAAGGCCGGGCGGGTACGCAAGGTGATCTGCTCCTTCCCCCGC
CAGGCGGACTCGCACCATTTCGACGCGCGCTACCGCGCCGGGGAGATCGAGCTGGAGCTGGTGCCGCAGGGCAACCTCGC
CGCGCGCATCCAGGCCGCGGGCGCCGGCCTCGGCGCGATCTTCACCCCGACCGGCTTCGGCACCCTGCTCGCCGAGGGCA
AGGAGACGCGGCGGATCGACGGCAAGGACTATGTGCTCGAATATCCGATCCACGCCGATTTCGCGCTGATCAAGGCGCAG
CGGGCGGATCGCTGGGGCAATCTGGTATACCGCAAGACCGCCCGCAACTTCGGCCCGATCATGGCGATGGCGGCGAAGAC
CGCGATCGCGCAGGTGGCCGAGATCGTGCCGCTCGGCTCGCTCGATCCCGAAGCGATCGTGACCCCCGGCATCTTCGTGC
AGCGCGTCGTCCAGGTCGCGCCCGGCGCCGCCCATTGA

Protein sequence :
MIDKGFASIDQAVADIFDGASVMVGGFGTAGMPDELIDALIARNVGGLTIISNNAGNGETGLAALIKAGRVRKVICSFPR
QADSHHFDARYRAGEIELELVPQGNLAARIQAAGAGLGAIFTPTGFGTLLAEGKETRRIDGKDYVLEYPIHADFALIKAQ
RADRWGNLVYRKTARNFGPIMAMAAKTAIAQVAEIVPLGSLDPEAIVTPGIFVQRVVQVAPGAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 7e-38 42