|
Name : Swit_4314 (Swit_4314) Accession : YP_001264792.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : 2-dehydro-3-deoxyglucarate aldolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3836 EC number : 4.1.2.20 Position : 4756158 - 4756913 bp Length : 756 bp Strand : + Note : PFAM: HpcH/HpaI aldolase DNA sequence : ATGAACGCGCTCAAGACGGCGCTCGCCGAACGGCGCCCGCAGATCGGCCTGTGGCAGGCGCTGGCCAATCCCTACACGGC GGAGATCTGCGCCGGGGCGGGCTATGACTGGCTGCTGTTCGACGGCGAGCATGCGCCCAACACGATCCAGACGCTGCTCG CGCAGCTCCAGGCGGTCGCGCGCCATCCGGTCGAGCCGGTGGTGCGCCCGGCGGTCGGCGATCCGGTGGTGATCAAGCAA TATCTCGACATCGGCTTCCGCTCGCTGCTGGTGCCGATGGTCGAGAGCGCGGCGCAGGCCGAGATGCTGGTCGCCGCGAC CCGCTTCCCGCCGCGCGGCATCCGCGGCGTCGCCAGCGCGACCAGCCGGGCGTCGGGCTTCGGCGCCGATGGCGGCTATC TCGCCCGCGCGCATGAGGACATCTGCCTGATCGTCCAGATCGAAAGCCGCGCCGGCCTCGACGCGATCGAGGAGATCGCC GCCGTCGACGGGGTCGACGCGCTGTTCATCGGCCCGGGCGACCTGGCCGGCGCGCTCGGCCATCTCGGCAACCCCGGCCA TGCCGAGGTGCAGGACGCGATCGCGGGCGCGCTCGACCGGGTCCAGCGCGCGGGCAAGGCGGCCGGCATCTTCGCCCTGT CGCCCGAGGACGCCCGCGCCCGCATGGCGGCCGGCGCCTGCTTCGTGTCGATCGGCACCGACATCGGCGTGCTGATGAAG GGAAGCCGGGGCCTGCTCGACGCGCTGAAGGGCTGA Protein sequence : MNALKTALAERRPQIGLWQALANPYTAEICAGAGYDWLLFDGEHAPNTIQTLLAQLQAVARHPVEPVVRPAVGDPVVIKQ YLDIGFRSLLVPMVESAAQAEMLVAATRFPPRGIRGVASATSRASGFGADGGYLARAHEDICLIVQIESRAGLDAIEEIA AVDGVDALFIGPGDLAGALGHLGNPGHAEVQDAIAGALDRVQRAGKAAGIFALSPEDARARMAAGACFVSIGTDIGVLMK GSRGLLDALKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaI | AAO17185.1 | HpaI | Not tested | tcd island | Protein | 3e-55 | 51 |
