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Name : Swit_4305 (Swit_4305) Accession : YP_001264783.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Virulence Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 4748948 - 4750450 bp Length : 1503 bp Strand : + Note : TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase DNA sequence : ATGACCCAGGATCGCCGCAGCGGCGCCATCGACCGCATCACCGCCATCGACGACGGCTGCATCGGCCACTTCATCGCGGG GCAGGCAGTGCCCGGCGCCGGCACCACCTTCGACGTGACGGAGCCCGCGACGGGCCAGTCGCTCGGCACCGCGCGCGACG CGACCGCCGGGGAGCTCGACGCCGCCGTCAAGGCCGCCAAGGACGCTTTCCCCGCCTGGGCGGCGGTGCCGGGCGACAAG CGCCGCGCCGTCCTCCACCGCATCGCCGACCTGATCGTCGAGCGGGCCGAGGAGATCGCCGCGGTCGAGTGCGTCGACGC CGGCCAGTGCTGGCGCTTCATGTCGAAGGCGGCGATCCGCGGCGCGGAGAATTTCCGCTTCTTCGCCGATCGCGCGCCGG GCGCCCGCGACGGCCAGGCGCTGCCGGCGGGCGGGCAGCTCAACGTCACCACCCGCACCCCGATCGGCCCGGTCGGCGTG ATCACGCCGTGGAACACGCCGTTCATGCTGTCGACCTGGAAGATTGCCCCCGCGCTGGCGGCGGGCTGCACGGTCGTCCA CAAGCCGGCCGAATGGTCGCCCTATTCGGCGCGCCTGCTGGTCGAGATCGCGCATGAGGCGGGGCTGCCCGCCGGCGTGT TCAACGCGGTCAACGGCCTGGGCGAGACGACCGGCCGGCGGCTGACCGAGCATCCCGACATCAAGGCGGTGGCCTTCGTC GGGGAATCGCGCACCGGATCGGCGATCATGAAGCAGGGCGCCGACACGCTGAAGCGCGTCCATTTCGAGCTGGGCGGCAA GAACCCGGTCATCGTCTTCGACGACGCCGATCTCGATCGCGCGCTCGATGCCGTGGTGTTCATGATCTACTCGCTCAACG GGCAGCGCTGCACCTCCTCGTCGCGGCTGCTGGTCCAGTCGTCGATCCGCGAAGCGTTCGAGGCGAAGCTCGCCGCGCGC GTCGCCAACCTCAAGGTCGGCGATCCGCTCGACCCGGCGACCGAGGTCGGTCCGCTGATCCACCAGCGCCATCTCGACAA GGTCGCCAGCTACATGGACATCGCCCGCGCCGACGGCGCGAAGATCGCGGTCGGCGGCGAGCGGATCGAGGGGGCCGGCT ATTTCTTCCAGCCGACCCTGTTCACCGGCGCGGCCCAGTCGATGCGGATCGCGCAGGAGGAGATTTTCGGCCCGGTCCTG ACCGTCATCCCGTTCGAGGACGAGGCCGACGCGATCGCCAAGGCGAACGACGTCGAATATGGCCTGGCCGGCTATGTCTG GACCCGCGACATGGGCCGCGGCCTGCGCGTCTCGCAGGCGCTGGAGGCCGGCATGGTCTGGGTCAACAGCGAGAATGTCC GCCACCTGCCGTCGCCGTTCGGCGGCGTGAAGGCGAGCGGCATCGGCCGCGACGGCGGCGACTGGAGCTTCGACTTCTAC ATGGAGACGAAGAACATCGCGCTCGCCTATCAGGACCATGCGATCCAGAAGCTGGGCGCCTGA Protein sequence : MTQDRRSGAIDRITAIDDGCIGHFIAGQAVPGAGTTFDVTEPATGQSLGTARDATAGELDAAVKAAKDAFPAWAAVPGDK RRAVLHRIADLIVERAEEIAAVECVDAGQCWRFMSKAAIRGAENFRFFADRAPGARDGQALPAGGQLNVTTRTPIGPVGV ITPWNTPFMLSTWKIAPALAAGCTVVHKPAEWSPYSARLLVEIAHEAGLPAGVFNAVNGLGETTGRRLTEHPDIKAVAFV GESRTGSAIMKQGADTLKRVHFELGGKNPVIVFDDADLDRALDAVVFMIYSLNGQRCTSSSRLLVQSSIREAFEAKLAAR VANLKVGDPLDPATEVGPLIHQRHLDKVASYMDIARADGAKIAVGGERIEGAGYFFQPTLFTGAAQSMRIAQEEIFGPVL TVIPFEDEADAIAKANDVEYGLAGYVWTRDMGRGLRVSQALEAGMVWVNSENVRHLPSPFGGVKASGIGRDGGDWSFDFY METKNIALAYQDHAIQKLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 1e-76 | 46 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 3e-60 | 43 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-59 | 41 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-59 | 41 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-59 | 41 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-59 | 41 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-59 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swit_4305 | YP_001264783.1 | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | VFG0082 | Protein | 5e-60 | 41 |
