Gene Information

Name : Swit_4270 (Swit_4270)
Accession : YP_001264748.1
Strain : Sphingomonas wittichii RW1
Genome accession: NC_009511
Putative virulence/resistance : Unknown
Product : 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3836
EC number : 4.1.2.20
Position : 4708757 - 4709557 bp
Length : 801 bp
Strand : -
Note : TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase

DNA sequence :
GTGAACATGTTCAAGGCCGCGATCGCCACCGGCCGGCGGCAGATCGGCTTCTGGCAGGCGCTCGCTACTCCCTATACGGC
GGAGATCTGCGCGGGCGCCGGCTTCGACTGGCTGCTGATCGACGGCGAGCATGGCCCCAATGATCTGCCGCTGGTGCTCC
GGCAGCTACAGGCGATCGAGGGCTCCCCGGCCGAGCCGGTCGTCCGCCTGCCCTGCGCCGACACGGTGCTGGTGAAGCAA
TATCTCGACATCGGCGCGCGCACCCTGCTCGTCCCGATGATCGAGAGCGCGGCGCAGGCCGCGGCGATGGTCGCCGCCTG
CCGCTATCCGCCGCGCGGCGTCCGCGGCGTCGGATCGGCGATCGGCCGGGCCAGCCGCTGGAACAGGACGCCCGGCTATC
TCCACGACGCCGAACGGGACATCTGCCTGCTGTTGCAGGTGGAGAGCGTCGCCGGGCTGGAGGCCTGCCACGCCATCGCC
GCCACCGACGGCGTCGACGGCGTCTTCATCGGCCCGTCCGACCTCGCCGCCGCGCTCGGCCATCTCGGCCATCCCGGCCA
TCCCGACGTCCAGGCGGCGATCGCCGGCGCGATCGATCGCGTCCTGTCTGCCGGCAAGGCGGCGGGCCTGCTCGCGGCGG
ACGAGCGGCTGGCGCGGCGCTATCTGGCGGCGGGGGCGAGCTTCGTCGCGGTCGGCACCGACGTCACCGTCCTGGCGCGC
GGCGCCGAGGCGCTGGCCGCCCGCTTCCGCGAGGACCCGGGCGCGCCCACGACCGGAATGGTCCCCGACCCGACCTACTG
A

Protein sequence :
MNMFKAAIATGRRQIGFWQALATPYTAEICAGAGFDWLLIDGEHGPNDLPLVLRQLQAIEGSPAEPVVRLPCADTVLVKQ
YLDIGARTLLVPMIESAAQAAAMVAACRYPPRGVRGVGSAIGRASRWNRTPGYLHDAERDICLLLQVESVAGLEACHAIA
ATDGVDGVFIGPSDLAAALGHLGHPGHPDVQAAIAGAIDRVLSAGKAAGLLAADERLARRYLAAGASFVAVGTDVTVLAR
GAEALAARFREDPGAPTTGMVPDPTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaI AAO17185.1 HpaI Not tested tcd island Protein 5e-60 57