Gene Information

Name : Swit_4220 (Swit_4220)
Accession : YP_001264698.1
Strain : Sphingomonas wittichii RW1
Genome accession: NC_009511
Putative virulence/resistance : Unknown
Product : glycerol kinase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0554
EC number : -
Position : 4649001 - 4650530 bp
Length : 1530 bp
Strand : -
Note : TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY

DNA sequence :
ATGACCCAATTCGTCGGCGCGATCGACCAGGGCACGACCAGCTCGCGCTTCATCGTCTTCGACCGGCACGGCGCGATCCT
CGCCGTCGCGCAGAAGGAGCATCGCCAGATCTATCCCCGTCCGGGCTGGGTCGAGCATGATCCGCTGGAGATATTGGCGA
ACACCCAGGAGGTGATCGGCGCCGCGCTGGCCCGCGCCAACCTGACGGCGGCGGACCTCGCCGCCGTCGGCATCACCAAC
CAGCGCGAGACCAGCCTGTTGTGGGACCGCGAGACCGGGCGACCGCTGTGCAACGCGCTCGTCTGGATGGACACGCGCAC
CGACGAGCTGGTGCAGCGCTATCGCCGCGACGGCGGGCAGGACCGGTTCCGCGACAGGACCGGCCTGCCGCTGGCGACCT
ATTTCTCGGCGCTCAAGCTGCGCTGGATCCTCGACAATGTCGACGGCGCCCGCGCGCAGGCGGAATCGGGCCGCGCGCTG
TTCGGGACGATCGACAGCTGGCTGGCCTGGAACCTGACCGGCGGCCCCGACGGCGGCGTCCACCTCACCGACGTCACCAA
CGCCAGCCGCACCATGCTGATGGACCTCGCGACCTGCCGATGGGACGACGATCTGCTCGCGACCTTCGGCATCCCGCGCG
CCTGCCTGCCGCGCATCGTCGCCTCGTCGGACCTGCACGGCACGATCCGGACGCCGCCGCTCGACGGCGCGCGCCTCGCC
GGCATCCTCGGCGACCAGCAGGCCGCGCTGGTCGGCCAGGCCTGCTTCGCGCCGGGCGAGGCGAAGAACACCTACGGCAC
CGGCTCCTTCCTGCTGATGAACACCGGCACCGAACCCGTCCGGTCGAAGGCCGGGCTGCTCACCACCCTCGCCTACCGGT
TCGGCGACGAGCCGCCCCGTTATGCGCTGGAGGGGGCGATCGCGATCACCGGCGCGCTCGTCCAATGGCTGCGCGACAAT
CTCGGCCTGTTCGACTCCGCGCCGGAGATCGAGGCGCTCGCCCGGTCGGTGCCCGACAATGGCGACGTCTATATCGTCCC
GGCCTTTTCCGGCCTCTACGCGCCCTATTGGGACGACAGCGCGCGCGGCGTGATCGCCGGGCTCACCCGCTTCTCGAACC
GCGGCCACATCGCCCGCGCGGCGCTCGAGGCGACCGCCTATCAGCTCTGCGACGTCGTCGCGGCGATGGAGGCCGACAGC
GGCATCCGGCTCGCCACGCTCAAGACCGACGGCGGCATGGTCGCCAACGAGCTGCTGATGCAGTTCCAGGCCGACATGCT
CGGCGCGCCGGTGGTCCGCCCCCGGATCACCGAGACGACCGCGCTCGGCGCCGCCTATGCGGCGGGGCTGGCGGTCGGCT
ACTGGTCGGGCACGCAGGAGCTGCGCGACAATTGGGGCGTCGACGCGACCTGGCGGCCGACCATGCCGGCCGAGCTTCGC
GCCCACCACCAGCGGTCCTGGAAGAAGGCGATCGGCAAGTCGCTCGGCTGGATCGATCGGCCGCAGGCCGCGGCGGACGA
CGTCGGGTGA

Protein sequence :
MTQFVGAIDQGTTSSRFIVFDRHGAILAVAQKEHRQIYPRPGWVEHDPLEILANTQEVIGAALARANLTAADLAAVGITN
QRETSLLWDRETGRPLCNALVWMDTRTDELVQRYRRDGGQDRFRDRTGLPLATYFSALKLRWILDNVDGARAQAESGRAL
FGTIDSWLAWNLTGGPDGGVHLTDVTNASRTMLMDLATCRWDDDLLATFGIPRACLPRIVASSDLHGTIRTPPLDGARLA
GILGDQQAALVGQACFAPGEAKNTYGTGSFLLMNTGTEPVRSKAGLLTTLAYRFGDEPPRYALEGAIAITGALVQWLRDN
LGLFDSAPEIEALARSVPDNGDVYIVPAFSGLYAPYWDDSARGVIAGLTRFSNRGHIARAALEATAYQLCDVVAAMEADS
GIRLATLKTDGGMVANELLMQFQADMLGAPVVRPRITETTALGAAYAAGLAVGYWSGTQELRDNWGVDATWRPTMPAELR
AHHQRSWKKAIGKSLGWIDRPQAAADDVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glpK YP_005139160.1 glycerol kinase Not tested Not named Protein 8e-113 55