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Name : Swit_4158 (Swit_4158) Accession : YP_001264636.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 4573090 - 4574523 bp Length : 1434 bp Strand : + Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase DNA sequence : ATGGGCATGGCGTTGCAGCGCGAGGCTTGCCTGATCGATGGCGAATGGGTGTCGGGCGACGACTGGATCATCGTCGACAA CCCCGCCACCGGCGCCGTCCTTGGCCGTGTGCCGAAGCTGGGTCGGGAGGAGACCGAGCGCGCGATCGCCGCGGCCGAGC GCGCCCAGCCGGCGTGGAGCGCGCTGCTCGCCGCCGATCGCGCCCGCATCCTGCGCCGCTTCCACGACCTGATGATCGAG CGGATCGACGATCTGGCCGCGCTGCTGACCGCCGAGCAGGGCAAGCCGATCGTGGAGGCGAAGGGCGAGATACGCTACGC CGCCGCCTTCATCGAATGGTATGCCGAGGAGGCGAAGCGCATCTATGGGGAGGTTGTCCCGCCGCACGCCGCCGACAAGC GCATCATCGTCCTGAAGCAGCCGATCGGCGTGGTCGCGGCGATCACGCCCTGGAACTTCTCGGCGGCGATGATCACCCGC AAGATCGGCCCCGCGCTGGCGGCCGGCTGCACCGCGATCGTCAAGCCGGCGTCGCAAACCCCGTTCACCGCGCTCGCCAT CGCCGCGCTGGCGGAGGAGGCAGGCATTCCGGCGGGCGTGCTCAACGTCGTCACCGGCGGCGCGGCCGATATCGGCGGGG CGCTGCTCGACAGCCCGGCGGTCCGCAAGCTCAGCTTCACGGGATCGACCGAGGTCGGCGCGGTGCTCTATGCCCGGTCG GCGCCGACCATCAAGAAGTTGAGCCTCGAACTGGGCGGCAACGCGCCCTTCATCGTCTTCTCCGACGCCGACATCGATGC GGCGGTCGAAGGCGCGATCGCCTCCAAATTCCGTAATGCCGGGCAGACCTGCGTCTGCGCCAACCGTCTCTACGCCCAGG CCGACATCTATGACGCCTTCGTCGCGCGGCTGGCCGAGGCGGCGGCGGCGCTCAGGGTCGGCGACGGCCGTGCCGCCGAT ACCCAGATCGGCCCGCTGATCGACGCCGCCGCCGTCGCGAAGGTGGAGGAGCATGTCGCCGATGCGCTGGACAAGGGCGG CGCGATCGTCACCGGCGGCCGGCGCGGTCCGTTCGGCGATCGCTATTACGTTCCCACCGTGATCCGCGACGTAACCCAGG ACATGCTGGTCACGCGGGAGGAGACCTTCGGGCCGGTGGCGCCCGTGATCCGCTTCGAACGCGACGAGGACGTGGTGGCG ATGGCCAATGCCACGCCATTCGGCCTCGCCGCCTATTTCTACGCGCGCGACATCGGCCGCATCTGGAAGGTGGCCGAGGC GATCGAGGCAGGTATCGTCGGCGTCAACACCGGCCTGATCTCGACCGAGGTCGCGCCGTTCGGCGGCGTCAAGCTGTCGG GTCTCGGTCGCGAGGGATCGCGCCACGGGATCGAGGAGTATCTCGAGATCAAATATGTCTGCCTGGGCTTCTGA Protein sequence : MGMALQREACLIDGEWVSGDDWIIVDNPATGAVLGRVPKLGREETERAIAAAERAQPAWSALLAADRARILRRFHDLMIE RIDDLAALLTAEQGKPIVEAKGEIRYAAAFIEWYAEEAKRIYGEVVPPHAADKRIIVLKQPIGVVAAITPWNFSAAMITR KIGPALAAGCTAIVKPASQTPFTALAIAALAEEAGIPAGVLNVVTGGAADIGGALLDSPAVRKLSFTGSTEVGAVLYARS APTIKKLSLELGGNAPFIVFSDADIDAAVEGAIASKFRNAGQTCVCANRLYAQADIYDAFVARLAEAAAALRVGDGRAAD TQIGPLIDAAAVAKVEEHVADALDKGGAIVTGGRRGPFGDRYYVPTVIRDVTQDMLVTREETFGPVAPVIRFERDEDVVA MANATPFGLAAYFYARDIGRIWKVAEAIEAGIVGVNTGLISTEVAPFGGVKLSGLGREGSRHGIEEYLEIKYVCLGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-111 | 61 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-62 | 41 |
