Gene Information

Name : Swit_4027 (Swit_4027)
Accession : YP_001264509.1
Strain : Sphingomonas wittichii RW1
Genome accession: NC_009511
Putative virulence/resistance : Unknown
Product : thioredoxin reductase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0492
EC number : -
Position : 4429755 - 4430726 bp
Length : 972 bp
Strand : +
Note : TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase

DNA sequence :
ATGACCGCCAGCCATTCGACCCGCATGCTGATCCTGGGATCCGGTCCCGCCGGCCTGTCCGCCGCCATCTACGGCGCGCG
CGCCGGGCTCGCGCCGATCGTGGTGCAGGGGCTCCAGCCGGGCGGGCAGCTCACCATCACCACCGACGTCGAGAATTATC
CCGGCTTCCGCGACGTGATCCAGGGCCCCTGGCTGATGCAGGAGATGCAGGCGCAGGCCGAGCATGTCGGCGCGACGATG
ATGTGGGATACGATCGTCGACGTCGACCTGAGCGAGCGGCCGTTCCGCCTGCGCGGCGACGGCGGCACCCTCTATGTCTG
CGACACGCTGGTGATCGCGACCGGCGCGCAGGCCAAGTGGCTGGGCGTCGAGGGCGAGGCGGCGCTGGGCGGCAAGGGCG
TGTCGGCCTGCGCGACCTGCGACGGTTTCTTCTATCGCGGCAAGAAGGTCGCGGTGATCGGCGGCGGCAACACCGCGGTC
GAGGAGGCGCTCTACCTGACCAACCACAGCCAGGACGTGACGCTGATCCACCGCCGCGATTCGCTGCGCGCCGAGAAGAT
CCTGCAGGACCGGCTGTTCGCCCATCCCAACGTCAAGGTGCTGTGGAACAAGCAGGTCGATCGCTTCGTCGGCGGCAGCG
GCAATGAGGGGCTGGTCGCGATCGCGCTGCGCGACACCGAGACCGGCGAGACGTCCGAACTGGCGGTCGACGGCGGTTTC
GTCGCGATTGGCCACAGCCCGGCGACCGAGCTGTTCCGCGGCCATCTGGAGCTCGACGAGGACGGCTATCTGGTCGTCGA
GAAGGGCGGCACCCGGACCAGCGTCCCCGGCGTGTTCGGCGCCGGCGACGTCTCCGACAAGGTCTACCGCCAGGCGGTCA
CTGCCGCCGGCATGGGCTGCATGGCCGCGCTCGACGTCGAACGCTTCCTGGCCGAGGCCGATTTCGAAGCGCGGGCGACC
GTGGCGGCCTAA

Protein sequence :
MTASHSTRMLILGSGPAGLSAAIYGARAGLAPIVVQGLQPGGQLTITTDVENYPGFRDVIQGPWLMQEMQAQAEHVGATM
MWDTIVDVDLSERPFRLRGDGGTLYVCDTLVIATGAQAKWLGVEGEAALGGKGVSACATCDGFFYRGKKVAVIGGGNTAV
EEALYLTNHSQDVTLIHRRDSLRAEKILQDRLFAHPNVKVLWNKQVDRFVGGSGNEGLVAIALRDTETGETSELAVDGGF
VAIGHSPATELFRGHLELDEDGYLVVEKGGTRTSVPGVFGAGDVSDKVYRQAVTAAGMGCMAALDVERFLAEADFEARAT
VAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trxB AFC76431.1 TrxB Not tested AbaR5 Protein 2e-80 57
trxB CAJ77014.1 thioredoxin reductase Not tested AbaR1 Protein 2e-80 57