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Name : Swit_3779 (Swit_3779) Accession : YP_001264262.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 4147384 - 4148934 bp Length : 1551 bp Strand : - Note : PFAM: ABC transporter related; SMART: AAA ATPase DNA sequence : ATGACCCTGCTCGCCGCCGACAATCTCGACATCCGGATCGGCGGCCGGCGGATCGTCGAGGGCGCGAGCTTCGCGATCGC GGCGGGCCGCTCGCTGGCGCTGGTCGGCGCATCGGGATCGGGCAAGAGCCAGACCTGCCTCGCCCCCTTCGGCCTGTCGC CCGCGACCGTCCAGGGCTCCTTCCGGCTCGACGGCGAGGAACTGGTCGGCGCACGCGAGGCACGGCTGCGCCATGTCCGC GGCGGCGACGTCGGCTTCGTCTTCCAGCAGCCTCTGACCGCGCTGACCCCGCACCTGACGATCGGCGCCCAGCTCCGCGA GGCCTGGACCCAGGCCGGGGCGCCACGCCCGAGCCGGGCGGAGATGGCCGCCGCGCTCGAACGGGTCGGGCTCAACGACC CGCGCGAGCGGCTCGACCAATATCCGCACCGCCTGTCGGGCGGGCAGCGGCAGCGTGCGCTGATCGCCATGGCGATCGCC CATCGCCCGAAGCTGCTCGTCGCCGACGAGCCGACCACCGCGCTCGACGCGATGCTGCGCGCCGAGATCATGGTGCTGCT CGGCCGGCTGTGCGACGAGGAGGGGATGGCGCTGCTGCTCGTCAGCCACGACCTCGCCGCCGTCGCCGACCATGCCGACG CCGTCGCGGTGATGCACGCCGGCCGGATCGTCGAGACCGGCCCGACCCGCGCGGTGCTGGGCGATCCGAAGAGCGACTAT GCCCGCGCGCTGATCGCCGCCAGCCCCCGCCTCGACGGCCCCCCACCCGCGCTCGGCCCGGTCGGCACACCGCTGGTCGA GGCGCGGCAAGTGTCGGTCTCCTTCGCGCGACCGGGCTGGCGGCGCGGCCGTCTCCAGGCGGTCGACGCCGTCGACATCG ACGTGGCCGAGGGGGAGGCCGTGGCGATCGTCGGCGGATCGGGATCGGGCAAGTCGACGCTGGCGCGCGCGATCGCCCGG CTCGGCCCGATCGACGCGGGCGAGGTCCGCTGGCGCGGCGCCCCGCTGCCGCCGCGCAAGGCGATGCGCCCGCGCGACCG CGCCGGGCTCCAGCCGGTGTTCCAGGACCCGGTCGCCAGCCTCGATCCGCTGTGGAAGGTCCGCGACATCGTCGCCGAGC CGCTGCGCCGGCTGCGCCCCGACCTCGACGATGCGGCGGTCGCCGCGCGGGTCGAGGCGGTGCTGGCCGAGGTCGGGCTC GACCCCGCGCTCGCCGGCCGGCGGCCCGCCGCGCTGTCGGGCGGCCAGGCGCAGCGCGTCGCGATCGCCCGCGCGCTCGG CCCCGATCCGGCGATGCTGCTGCTCGACGAGGCAACCTCGGCGCTGGACGTGCTCGTCGCGGGCACGATCCTCGACCTGC TCGCCGAGCTCCAGAAGCAGCGCGGCCTCGCCATATTGATGATCACCCACGACCTCGCCGTCGCCCGGCGGCTCTGCCAC CGCATCGTCGTGATGGATGCGGGCCGGATCGTCGAGGAGGGACCGGCCGAGCGCCTGATCGCGGCGCCGGCCCATCCCAT CACGGCGAAACTGGTGGCGGCGAGCCGCTGA Protein sequence : MTLLAADNLDIRIGGRRIVEGASFAIAAGRSLALVGASGSGKSQTCLAPFGLSPATVQGSFRLDGEELVGAREARLRHVR GGDVGFVFQQPLTALTPHLTIGAQLREAWTQAGAPRPSRAEMAAALERVGLNDPRERLDQYPHRLSGGQRQRALIAMAIA HRPKLLVADEPTTALDAMLRAEIMVLLGRLCDEEGMALLLVSHDLAAVADHADAVAVMHAGRIVETGPTRAVLGDPKSDY ARALIAASPRLDGPPPALGPVGTPLVEARQVSVSFARPGWRRGRLQAVDAVDIDVAEGEAVAIVGGSGSGKSTLARAIAR LGPIDAGEVRWRGAPLPPRKAMRPRDRAGLQPVFQDPVASLDPLWKVRDIVAEPLRRLRPDLDDAAVAARVEAVLAEVGL DPALAGRRPAALSGGQAQRVAIARALGPDPAMLLLDEATSALDVLVAGTILDLLAELQKQRGLAILMITHDLAVARRLCH RIVVMDAGRIVEEGPAERLIAAPAHPITAKLVAASR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-55 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-55 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 7e-55 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-55 | 41 |
