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Name : Swit_3201 (Swit_3201) Accession : YP_001263686.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3518084 - 3519943 bp Length : 1860 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGGCCGATATTCCCGCGCGCACCGAGATGAAGGTGACGACCGGTCCGATCCGGGGATCGCGCAAGATCCATGTCGAGGG GCCTCAGGGCGTCCGCGTCGCGATGCGCGAGATCGCGCTCGAGCCGTCGTCGGGCGAGCCGCCGGTCCGCGTCTATGACT GCTCCGGCCCCTATACCGATCCCAACGCCCATATCGACATCATGGCCGGCCTGCCCGCGCTGCGCCGCGACTGGATTCTC GGGCGCGGCGACGTCGAGGACTATGAGGGCCGCGCGATCAAGCCCGAGGACAACGGCCTGAAGGGGCCGGACCGGTCGGG CGGCGTCACCCCCTTCCCGAACGTGGTGCGGCGCCCGCTGCGCGCGAAGGCAGGGCAGAATGTCAGCCAGATGCACTATG CCCGGCGCGGCATTATCACGCCCGAGATGGAATATGTCGCGATCCGCGAGAATGTCGGCCGCGCCGCGCTCAAGGAGAAG CTGCTGCGCGACGGCGAGGATTTCGGCGCGGCGATCCCCGACTTCGTCACCCCCGAATTCGTCCGCGACGAGGTGGCGCG CGGCCGGGCGATCATCCCCAGCAACATCAACCATCCCGAATCGGAGCCGATGGCGATCGGCCGCAACTTCCTGGTGAAGA TCAACGCCAATATCGGCAATTCGGCGGTCGCTTCCGACGTCGCGGCCGAGGTCGACAAGATGGTCTGGTCGATCCGCTGG GGCGCCGACACGGTGATGGACCTGTCGACCGGCCGCAACATCCACGACACGCGCGAATGGATCCTGCGCAACTCGCCGGT CCCGATCGGCACGGTGCCGATCTACCAGGCGCTGGAGAAGGTCGGCGGCATCGCCGAGGACCTGACCTGGGAAATCTTCC GCGACACGCTGATCGAGCAGGCCGAGCAGGGCGTCGACTATTTCACCATCCATGCCGGCGTCCGCCTGCCCTTCATCCCA ATGACGGCCAAGCGCGTCACCGGCATCGTCAGCCGGGGCGGATCGATCATGGCGAAATGGTGCCTGGCGCACCATCGCGA GAGCTTCCTCTACGAGCGGTTCGACGAGATCTGCGAGATCATGAAGGCCTATGACGTCGCCTTCTCGCTGGGCGACGGCC TGCGCCCCGGATCGATCGCCGACGCCAATGACGAGGCGCAGTTCAGCGAATTGAAGACGCTGGGCGAGCTGACCCAGATC GCCTGGCAGCACGACGTGCAGGTGATGATCGAGGGCCCCGGCCATGTGCCGATGCACAAGATCAAGGCGAACATGGACAA GCAGCTCGAAGCCTGCGGCGAGGCGCCCTTCTACACGCTCGGGCCGCTGACCACCGATATCGCGCCGGGCTATGATCACA TCACCTCGGCGATCGGCGCGGCGATGATCGGCTGGTTCGGCACGGCGATGCTCTGCTACGTCACGCCGAAGGAGCATCTG GGCCTGCCCGACCGCGACGACGTGAAGGTCGGCGTGGTCACCTACAAGCTCGCCGCCCACGCCGCCGACCTGGCGAAGGG CCACCCGGCCGCCAAGCTGCGCGACGACGCGCTCAGCCGCGCCCGCTTCGAGTTCCGCTGGCGCGACCAGTTCAACCTGT CGCTCGATCCCGACACGGCCGAGCAGTATCACGACCAGACGCTGCCGGCCGAAGGCGCCAAGACCGCGCATTTCTGCTCG ATGTGCGGGCCGAAATTCTGCTCGATGAAGATCACCCAGGAGGTCCGCGACTTCGCCGCCACCAGGAACGCCCCTGCCGA CCAGTTCATCGCGGCCGGCGACGCCGAGGCGGGCATGCGCGCGATGAGCGACGTGTTCCGCGAGAAGGGCGGGGAGATCT ATCTGCCGGCGGCGGAGTAG Protein sequence : MADIPARTEMKVTTGPIRGSRKIHVEGPQGVRVAMREIALEPSSGEPPVRVYDCSGPYTDPNAHIDIMAGLPALRRDWIL GRGDVEDYEGRAIKPEDNGLKGPDRSGGVTPFPNVVRRPLRAKAGQNVSQMHYARRGIITPEMEYVAIRENVGRAALKEK LLRDGEDFGAAIPDFVTPEFVRDEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVAAEVDKMVWSIRW GADTVMDLSTGRNIHDTREWILRNSPVPIGTVPIYQALEKVGGIAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLPFIP MTAKRVTGIVSRGGSIMAKWCLAHHRESFLYERFDEICEIMKAYDVAFSLGDGLRPGSIADANDEAQFSELKTLGELTQI AWQHDVQVMIEGPGHVPMHKIKANMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHL GLPDRDDVKVGVVTYKLAAHAADLAKGHPAAKLRDDALSRARFEFRWRDQFNLSLDPDTAEQYHDQTLPAEGAKTAHFCS MCGPKFCSMKITQEVRDFAATRNAPADQFIAAGDAEAGMRAMSDVFREKGGEIYLPAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 67 |
