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Name : Swit_3128 (Swit_3128) Accession : YP_001263615.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3437518 - 3440097 bp Length : 2580 bp Strand : - Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase DNA sequence : ATGAACCTCGAGAAATTCACCGACCGCGCCAAGGGTTTCCTCCAGTCGGCGCAGACCGTGGCGATCCGCAACAGCCATCA GCGCATCGCCCCGGAACATCTGCTGAAGGCGCTGCTCGAGGACGAGCAGGGCATGGCGTCCGGGCTGATCAAGGCGGCCG GCGGCGATCCGGCGGTCGCGATGCGCGCGACCGACGCGGCGCTGGCGAAGATCCCGGCGGTGTCGGGCAGCGGGGCGCAA GCGACGCCCGGGCTCGACAACGACCTCGCCCGCGTCCTCGACCAGGCCGAGCAGATCGCCCAGAAGGCGGGCGACAGCTA CGTCACCGTCGAGCGGATGCTGCTGGCGCTGACCCTCGCCACCACCAGCCCGGCCGGCAAGGCGCTGGCCGAGGCCGGCG TGCGCGCCGAGGCGCTCAACGCCGCGATCAACGAGCTGCGCGGCGGCCGCTCCGCCGACACGGCGAGCGCCGAGGACCGC TATGACGCGCTCAAGAAATTCGCCCGCGACCTGACCCAGGCGGCGCGCGACGGCAAGCTCGACCCGGTGATCGGCCGCGA CGAGGAGATCCGGCGCACCATCCAGGTGCTGGCGCGGCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCCGGCGTCG GCAAGACCGCGATCGCGGAAGGGCTGGCGCTGCGCATCGCCAATGGCGACGTGCCCGACGGCCTCAAGGACCGCAAGGTG ATGGCGCTCGACATGGGCAGCCTGATCGCCGGCGCCAAATATCGCGGCGAGTTCGAGGAGCGGCTGAAGGGCGTGCTCGA CGAGGTGAAGGGCGCCGAGGGCCAGATCATCCTGTTCATCGACGAGATGCACACGCTGATCGGCGCGGGCAAGTCCGAGG GCGCGATGGACGCCGGCAACCTGCTCAAGCCCGCGCTGGCGCGCGGCGAGCTGCACTGCATCGGCGCGACCACGCTCGAC GAGTATCGCAAATATGTCGAGAAGGACCCGGCGTTGCAGCGGCGCTTCCAGCCGGTCTTCGTCGGCGAGCCGACGGTCGA GGACACCATCTCGATCCTGCGCGGGCTCAAGGAGAAGTACGAGCTGCACCATGGCGTGCGGATCACCGACGGGGCGATCG TCTCGGCGGCGACCTTGAGCAACCGCTATATCACCGACCGCTTCCTGCCCGACAAGGCGATCGACCTGATGGACGAGGCC GCGTCGCGGCTGCGCATGGAGGTCGAGTCGAAGCCCGAGGAGATCGAGACTCTCGACCGGCGGATCATCCAGCTCAAGAT CGAGCGCGAGGCGCTGAAGAAGGAGACCGACGCGGCCTCCAAGGACCGGCTCGACGCGCTCGAGGCCGACCTGGTCGAAC TGGAGGAGCAGTCGGCCGAGCTGACCCAGCGCTGGCAGGGCGAGAAGGACAAGATCAACGCCGAGGCCAAGCTCAAGGAG CAGCTCGACGCCGCCCGGATGGAGCTCGACCAGGCGCAGCGGCGCGGCGATCTCGCCCGTGCCGGCGAGCTGAGCTACGG CGTCATCCCCAATCTGGAGAAGGCGCTGGCCGGGGCGCAGTCGGCGTCGGCGGGCGCGATGCTGCGCGAGGAGGTGACGA GCGAGGACATCGCCTCGGTCGTCAGCCGCTGGACCGGCATCCCCGTCGACAAGATGCTCGAAGGCGAGCGCGAGAAGCTG CTCGCCATGGAGGACGAGCTCGGCAAGCGCGTGATCGGCCAGAAGGATGCGATCGAGGCGGTGTCGCGCGCCGTCCGCCG CAGCCGCGCGGGGCTCCAGGACCCGAACCGGCCGCTCGGCAGCTTCCTGTTCCTCGGCCCGACCGGCGTCGGCAAGACCG AGCTGACCAAGGCGCTCGCCGGCTTCCTGTTCGACGACGACTCGGCGATGGTCCGCATCGACATGTCGGAGTTCATGGAG AAGCACAGCGTCGCCCGGCTGATCGGCGCTCCTCCCGGCTATGTCGGCTATGAGGAGGGCGGCGTGCTGACCGAGGCGGT GCGGCGGCGGCCCTATCAGGTCGTGCTGTTCGACGAGGTCGAGAAGGCGCATGGCGACGTGTTCAACGTGCTCCTCCAGG TGCTCGACGACGGGCGGCTGACCGACGGCCAGGGCCGCACGGTCGACTTCTCGAACACGCTGATCATCCTGACCTCGAAC CTGGGCAGCCAGTTCCTCGCCAATCTCGGCGAGGGCCAGGCGGTCGAGACCGTCGAGGACCAGGTGATGGAGGTGGTCCG CGCCCATTTCCGGCCGGAATTCCTCAACCGGCTCGACGAGATCATCCTGTTCCACCGGCTCGGCCAGGAGCATATGGGCC CGATCGTCGACATCCAGGTCGGCCGGGTCGGCAAGCTGCTCAAGGACCGCAAGATCAAGCTAGAGCTGACCGACGGCGCC CGCGCCTGGCTCGGCCGGGTCGGCTATGATCCGGTCTACGGCGCGCGTCCGCTCAAGCGCGCGGTGCAGAAATATCTGCA GGACCCGCTCGCCGAGGCGCTGCTCAAGGGCGAGGTGCCCGACGGATCGGCCCTGCGCATCGACGAGGGCGACGGGAAGC TGGAACTGAAGGTGATGTGA Protein sequence : MNLEKFTDRAKGFLQSAQTVAIRNSHQRIAPEHLLKALLEDEQGMASGLIKAAGGDPAVAMRATDAALAKIPAVSGSGAQ ATPGLDNDLARVLDQAEQIAQKAGDSYVTVERMLLALTLATTSPAGKALAEAGVRAEALNAAINELRGGRSADTASAEDR YDALKKFARDLTQAARDGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIAEGLALRIANGDVPDGLKDRKV MALDMGSLIAGAKYRGEFEERLKGVLDEVKGAEGQIILFIDEMHTLIGAGKSEGAMDAGNLLKPALARGELHCIGATTLD EYRKYVEKDPALQRRFQPVFVGEPTVEDTISILRGLKEKYELHHGVRITDGAIVSAATLSNRYITDRFLPDKAIDLMDEA ASRLRMEVESKPEEIETLDRRIIQLKIEREALKKETDAASKDRLDALEADLVELEEQSAELTQRWQGEKDKINAEAKLKE QLDAARMELDQAQRRGDLARAGELSYGVIPNLEKALAGAQSASAGAMLREEVTSEDIASVVSRWTGIPVDKMLEGEREKL LAMEDELGKRVIGQKDAIEAVSRAVRRSRAGLQDPNRPLGSFLFLGPTGVGKTELTKALAGFLFDDDSAMVRIDMSEFME KHSVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRTVDFSNTLIILTSN LGSQFLANLGEGQAVETVEDQVMEVVRAHFRPEFLNRLDEIILFHRLGQEHMGPIVDIQVGRVGKLLKDRKIKLELTDGA RAWLGRVGYDPVYGARPLKRAVQKYLQDPLAEALLKGEVPDGSALRIDEGDGKLELKVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-103 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swit_3128 | YP_001263615.1 | ATPase | VFG2084 | Protein | 1e-113 | 45 |
| Swit_3128 | YP_001263615.1 | ATPase | VFG2076 | Protein | 2e-119 | 44 |
