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Name : Swit_3082 (Swit_3082) Accession : YP_001263570.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 3382613 - 3383374 bp Length : 762 bp Strand : + Note : PFAM: Integrase, catalytic region DNA sequence : ATGCGAAAGCGTGAAAACTATCCTGCGCCCGTAACTAGCGACAATCCGATCGAAATGCGCGCGCCACCGCTGGTGCAGCT GAAGCGGCAATATCCGGACGACCGAGCTATGCAGATATCCCACGAAGCGATCTATCGCAGTCTCTTCATCCAGTCGCGCG GAGTGCTCAAGAAGGAGCTCTTGGCGCATCTGCGCACGCAAAGGCAGATGCGGCTTGCCAAGGGCGCGAAGGCCGGACAT GGCCAGGGCCAGATCGTCGACATGATATCGATCCGCGAGCGCCCGGCTGAGGCTGAGGACCGGGCCGTACCGGGCCATTG GGAAGGCGACCTGCTCACCGGTGCCAATGACACATATATCGCCACGCTGGTCGAACGGCACACCCGTTTCGCGATGCTGG TGAAGTTACGGAGGAAGGATTCTGCGGCCGTCGCGGCAGCGCTCGCCCATCAGATCTGCAAGCTGCCTGAGGAACTCCGC CGCTCGCTGACCTGGGACCAGGGCAAGGAGATGGCGCGTCATCACAGCTTCACCATGGCCACTGACGTCCAGGTCTACTT CTGCGATCCGCGCAGCCCCTGGCAGCGCGGCAGCAACGAAAATACCAACGGCCTGCTCCGGCAGTATCTGCCGAGGGGCA CCGACGTCTCGCGTTTCTCACAAAGCCAGCTCAACGCGATTGCGATGTGGCTCAACCAACGTCCTCGAAAAACTCTGGAC TTCGAAACCCCAGCTGAGAAATTACAGGCCGTGTTGCGATGA Protein sequence : MRKRENYPAPVTSDNPIEMRAPPLVQLKRQYPDDRAMQISHEAIYRSLFIQSRGVLKKELLAHLRTQRQMRLAKGAKAGH GQGQIVDMISIRERPAEAEDRAVPGHWEGDLLTGANDTYIATLVERHTRFAMLVKLRRKDSAAVAAALAHQICKLPEELR RSLTWDQGKEMARHHSFTMATDVQVYFCDPRSPWQRGSNENTNGLLRQYLPRGTDVSRFSQSQLNAIAMWLNQRPRKTLD FETPAEKLQAVLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EXB5 | ABD94692.1 | putative IS30 family transposase | Not tested | ExoU island B | Protein | 7e-38 | 52 |
| CDCE8392_1981 | YP_005134512.1 | transposase-like protein | Not tested | Not named | Protein | 3e-37 | 46 |
