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Name : Swit_3067 (Swit_3067) Accession : YP_001263555.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 3364658 - 3366115 bp Length : 1458 bp Strand : + Note : PFAM: aldehyde dehydrogenase DNA sequence : ATGGTGGATCGCCACGCCTATCCAGCGCCACGCTTGTTCATCGATGGGGAGTGGATCGACGCCGGCGATCGCGACACCCT GCCGATCGCGAACCCGGCGACCGGGGAAGCGATCGGACGCTTGCCGGTCGCGACGCGCGCCGATCTCGATCGCGCGCTCG ACGCCGCGCGGCGGGGCTTTGTGGTCTGGCGCGCCAAGACCGCGCTGGAGCGCGCGGCGATCCTGCATCGGGCGGCCGGG TTGTTGCGCGAGCGCGCCGACGAGATCGGCCGGCTTTCGACCATCGAGCAGGGCAAGCTGGTGGGCGAGTCGATCGCCGA GGCGCAGGCGAGCGCCGATATCTTCGACTGGTTCGCCGAGGATGCGCGCCGCGACTATGGGCGCATCGTGCCGTCGAAGC AGCCGGCCGTCCGGCATTTGGTCGTGCACGAGCCGATCGGTCCCGCCGCGCTGTTCACGCCCTGGAACTTCCCGGTGACG ATCCCGGCACGCAAGCTGGCGGCGGCGCTGGCCGCCGGCTGCTCGGTGGTGATCAAGCCCGCCGAGGAAACGCCGATGAG CTGCCTGGAACTGGCGCGGGCGCTCGACGACGCCGGATTGCCGAAGGGCGTGCTCAACGTGGTGTTCGGCCTGCCGGCCG AGATCTCCGACTATCTGATCCGCTCCCCCGTCATCCGCAAGGTCAGCTTCACCGGCTCGACCGGCGTCGGCAAGCTGCTG GCGGGGATCGCGGCCGAGGTGATGAAGCCCACCACCATGGAGCTGGGCGGCCATGCGCCGGTGATCGTGTTCGACGATGT CGACATCGACATGGTGGTCCGCATGACCGCCGCGTCGAAGTTCCGCAACGCCGGGCAGATCTGCATCGCGCCGACCCGCT TCTACCTGCATGACCGGATCCACGATGCGTTCGTGGCGCGCTTCGCGGAAGCGGCGCGGGCGCTGACGCTGGGCAACGGG CTCGATCCCGGGACGCGCATGGGGCCGCTCGCCAATCCGCGCCGCGTCGTCGCCATGGAGGCGATGATCGGCGACGCGAT CGCCGGCGGTGCTGCGCTGCGCGCGGGCGGCGCGAAGGGCGACCTCCCCGGTGGCAATTTCTGGGAGGCGACGGTGCTGA GCGACGTGCCGGACAGCGCGCGAATCATGAACGAGGAACCGTTCGGGCCGGTGATCGCCACCCAGCGTTTCGAAACGATC GAGGATGTCGCGGAGCGCGCCAATCGCCTGCCCTATGGCCTCGCCGCCTATGCGTTCACGCGCTCCGCCGCGCAGGCGCA CCGGATCGGCGAGATGATCGAGGCCGGCATGGTCGGGGTCAACTTTCCGGTGCTCACCGGGCCGGAAACGCCGTTCGGTG GCGTCAAGGAAAGCGGCCATGGTTCCGACGGCGGCATCGAGGCGCTGCGCGGCTACCAGGTCACCAAATATATCGCCCAA GGGTATCTGCCGGGATAA Protein sequence : MVDRHAYPAPRLFIDGEWIDAGDRDTLPIANPATGEAIGRLPVATRADLDRALDAARRGFVVWRAKTALERAAILHRAAG LLRERADEIGRLSTIEQGKLVGESIAEAQASADIFDWFAEDARRDYGRIVPSKQPAVRHLVVHEPIGPAALFTPWNFPVT IPARKLAAALAAGCSVVIKPAEETPMSCLELARALDDAGLPKGVLNVVFGLPAEISDYLIRSPVIRKVSFTGSTGVGKLL AGIAAEVMKPTTMELGGHAPVIVFDDVDIDMVVRMTAASKFRNAGQICIAPTRFYLHDRIHDAFVARFAEAARALTLGNG LDPGTRMGPLANPRRVVAMEAMIGDAIAGGAALRAGGAKGDLPGGNFWEATVLSDVPDSARIMNEEPFGPVIATQRFETI EDVAERANRLPYGLAAYAFTRSAAQAHRIGEMIEAGMVGVNFPVLTGPETPFGGVKESGHGSDGGIEALRGYQVTKYIAQ GYLPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-67 | 41 |
