Gene Information

Name : Swit_2876 (Swit_2876)
Accession : YP_001263366.1
Strain : Sphingomonas wittichii RW1
Genome accession: NC_009511
Putative virulence/resistance : Virulence
Product : glycosyl transferase family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 3155707 - 3156711 bp
Length : 1005 bp
Strand : +
Note : PFAM: glycosyl transferase, family 2

DNA sequence :
ATGAGCGAGACGCTGCCGGTTCCCCTGCTCTCCGTCCCCCTGCTGTCTGTCATCGTCCCGGTGAAGGACGAGGAGGATGC
GATCGTCCCCTTCGTCACGCGGATGACGCGGGTGCTCGACGCGCTGCGCGATCCGCAGGGCGCGCCGATCGGCTGGGAGA
TCGTCTTCATCGACGACGGCAGCACCGACCGGACGATGGCGGCGATCCTGGTCGCGCACGATGCCGACCGCCGCGTCGCG
GCGCTGTCGCTGTCGCGCAACTTCGGCAAGGAAGCCGCGCTGTCGGCCGGGCTCGACCATGCCCGCGGCGCGGTGGTGGT
GCCGATCGACGTCGACATGCAGGACCCGCCCGAGGTGATCGGCGCGATGATCGACAAGTGGCGCGACGGCTATGAGGTGG
TCTACGGCGTCCGGCGCAACCGGCTGACCGACAGCCTGCCCAAGCGGCTGACCGCCGACCTCTATTATCGCGCGCACAAC
TGGCTCTCGATGGACAAGATCCCCGAGCATGCCGGCGATTTCCGCCTGCTCGACCGCAAGGTCGTCGAGGTGATCAAGCG
GATGCCCGAGCGCAACCGCTTCATGAAGGGCCTGTTCGCCTGGTCGGGCTTTCGCCAGACCGCGGTCGAATATGACCGGG
CCGAGCGCGCCGTCGGCACCACCAAGTTCAATTACTGGAAGCTGTGGCAGCTCGCGATCGACGGCATCACCTCGGCGTCG
ACCGCGCCCCTGCGGGTGTGGTCCTATGTCGGCGCGGTGATCGCGGTGGTGGCGCTGGTCTATGCGGTCTATATCGGCGT
CCGCACGCTGATCTACGGCGCCGACGTGGCGGGCTATCCGTCGCTGATGGTCGCGACGCTGTTCCTCGGCGGGGTCCAGC
TCCTCTCGCTCGGCATCCTCGGCGAATATGTCGGGCGCATCCTGGTCGAGACCAAGAAGCGGCCGATCTACATCGTCCGG
CAACGCATAGGCTGTGCTGAGCCCGAGATCGAGGACGCCGACTGA

Protein sequence :
MSETLPVPLLSVPLLSVIVPVKDEEDAIVPFVTRMTRVLDALRDPQGAPIGWEIVFIDDGSTDRTMAAILVAHDADRRVA
ALSLSRNFGKEAALSAGLDHARGAVVVPIDVDMQDPPEVIGAMIDKWRDGYEVVYGVRRNRLTDSLPKRLTADLYYRAHN
WLSMDKIPEHAGDFRLLDRKVVEVIKRMPERNRFMKGLFAWSGFRQTAVEYDRAERAVGTTKFNYWKLWQLAIDGITSAS
TAPLRVWSYVGAVIAVVALVYAVYIGVRTLIYGADVAGYPSLMVATLFLGGVQLLSLGILGEYVGRILVETKKRPIYIVR
QRIGCAEPEIEDAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 5e-62 52
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-63 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swit_2876 YP_001263366.1 glycosyl transferase family protein VFG0670 Protein 1e-62 51