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Name : secA (Swit_2687) Accession : YP_001263181.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 2970023 - 2972761 bp Length : 2739 bp Strand : + Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGCTCGGCGGCCTCGCCAAAGCCATCTTCGGATCGTCGAACGATCGTTATGTGAAGTCGCTGCGCCCGATCCTGCAGAA GATCGCAGGATTCGAGCCGACGCTCGAGGCGATGAACGACGAGGAGCTGGCCGCCCAGACGGTCAAATTCCGCCAGCGGC TCGACGCCGGCGAGACGCTCGATTCGCTGCTGCCCGAGGCGTTCGCCACGGTGCGCGAGGCGGCCCGCCGCGTGCTGGGC CAGCGCCATTACGACGTGCAGATGATCGGCGGCATCGTCCTCCATCGCGGCGAGATCGCCGAGATGCGGACCGGCGAGGG CAAGACGCTGGTCGCGACGCTGGCGGTCTACCTCAACGCGCTGCCGGGCGAGGGCGTCCACGTCGTCACCGTCAACGACT ATCTCGCTACCCGCGACGCGGAGTGGATGGGCCGCGTCTACCGCTTCCTCGGCCTGACCGTCGGCGTGATCGTGCCCAAC CTGTCCGACCAGGAACGGCGCGACGCCTATGGCGCCGACATCACCTACGGCACGAACAACGAGTTCGGCTTCGACTATCT GCGCGACAACATGAAATATGACCGCGCGCTGATGGTCCACCGGCCGTTCAACTTCGCGGTGGTCGACGAGGTCGATTCGG TGCTGATCGACGAGGCGCGCACCCCGCTGATCATCTCCGGCCCGACCGACGACAAGTCCGAACTGTACATGCAGGTCGAC GCGATCGTGAAGCAGGTCACCAAGGACGATTACGAGTTCGACGAGAAGCAGCGGTCGGTGGTGCTGACCGAGGACGGCAC CGAGCGGATCGAGCGGCTGCTGGAGGCGGCGGGCCTGCTCGAAGGCGGCAATCTCTACGCCTATGAGAACACCCAGGTCG TCCATCACCTGAACCAGGCGCTGCGCGCCAACGTCGCCTTCAAGCGCGACACCGACTATATCGTCAAGGACGAGAAGATC ATCATCATCGACGAGTTCACCGGTCGCATGATGGACGGCCGGCGCTGGTCGGACGGCCTGCACCAGGCGGTCGAGGCCAA GGAAGGCGTCAAGATCGAGCCCGAGAACCAGACGCTCGCCTCGATCACCTTCCAGAATTATTTCCGCATGTACCCCAAGC TGGGCGGCATGACGGGCACGGCCGCGACCGAGGCCCATGAATTCTACCAGATCTACAAGATGAACGTCGTCACGATCCCG ACCAACCTGCCGGTCAAGCGGATCGACCAGGACGACGAATTCTACAAGAACATGCTCGATAAATTCGCCGCGATCACCCA GGCGATCCGCGAGGCGAAGGAGCGCGGCCAGCCGGTGCTGGTCGGCACCGTGTCGATCGAGAAGTCGGAACTGCTGTCCG AGTTCCTGACCAAGGAGAAGGTCGAGCACAAGGTGCTCAACGCCCGCTACCACGAGCAGGAGGCGCACATCGTGGCGCAG GCCGGCCGGCTCGGCGCGGTGACGATCGCCACCAACATGGCGGGCCGCGGCACCGACATCCAGCTCGGCGGCAACCTCGA ATTCCGCATGCTCGACGAGCATCCCGCGCTCGAGATCGGCACCCCCGAATTCGACGCGGCGGCCGAGCGCATCCGCGGCG AGATCATCGCCGAGAAGGAAGCGGTGCTCGCCGCCGGCGGCCTGTTCGTGCTCGGCACCGAGCGGCACGAGAGCCGCCGC ATCGACAACCAGCTGCGCGGCCGGTCGGGCCGCCAGGGCGATCCGGGCCTCAGCCGCTTCTACCTGTCGCTCGACGACGA CCTGCTGCGCATCTTCGGCCCGCAGACGATGTTCGCGCGGATGATGAACAAGAACCTCGCCGACGGCGAGGCGATCGTCA GCCCGTGGATCTCCAAGGCGATCGAGACCGCGCAGAAGAAGGTCGAGGCGCGCAACTACGACATCCGCAAGCAGGTCGTC GAATATGACGACGTGATGAACGACCAGCGCAAGGTGATCTACGAGCAGCGCGCCGACATCATGGATGCCGAGACGGTCGA CGACGTCGTCACCGACATGCGCGCCGACACCGCCAATGCGATCGTCGGCGGCTGCTGCCCGCCGCACAGCTATCCCGAGC AGTGGGACGTCGATACGCTCAAGCTGCGCTCGGCCGAGACGCTGGGCATCACGCCGCCGTTCGACGAGTGGATCGAGCAG GACGGCATCGATCCCGAGATCCTGGCCGAGAAGGTGCTGGCCGAGGCCGACGCGGTGATCGCCGCCAAGCGCGCGACGAT CGACGACCAGAGCTGGCACGGCATCGAGAAGAGCGTGCTGCTCCAGACGCTCGACCATCACTGGAAGGAGCATCTGGCGA CGCTCGACGCGCTGCGCCAGGTGATCCACCTGCGCGCCTATGCGCAGAAGACGCCGATCAACGAATATAAGCACGAGGCC TTCGCGCTGTTCGAGCGGATGCTCGTCGCGATCCGCGAGGAGGTGACCCGCGTCCTCGCCCATGTCCGCTTCGAGATGGC GCCGCAGGACTATGCCGAGCTGCCGCCGATGCCCGACTTCGTCACCGAGCATGTCAACGCGCTGACCGGCGAGGACAATT CGGGCGACCGCGACGGCGGCACGCTGGGGATCATCGGCAGCCGGGTGCCGCAGGCGATCGCCGCCCCGGCCGGCGACGAT TTCGAGATCACCCCGGAGATCGCGGCGACGCTCGGCCGCAACTCGCTCTGCCCCTGCGGCTCGGGCCGCAAGTACAAGCA TTGCCACGGCGCGCTCTAA Protein sequence : MLGGLAKAIFGSSNDRYVKSLRPILQKIAGFEPTLEAMNDEELAAQTVKFRQRLDAGETLDSLLPEAFATVREAARRVLG QRHYDVQMIGGIVLHRGEIAEMRTGEGKTLVATLAVYLNALPGEGVHVVTVNDYLATRDAEWMGRVYRFLGLTVGVIVPN LSDQERRDAYGADITYGTNNEFGFDYLRDNMKYDRALMVHRPFNFAVVDEVDSVLIDEARTPLIISGPTDDKSELYMQVD AIVKQVTKDDYEFDEKQRSVVLTEDGTERIERLLEAAGLLEGGNLYAYENTQVVHHLNQALRANVAFKRDTDYIVKDEKI IIIDEFTGRMMDGRRWSDGLHQAVEAKEGVKIEPENQTLASITFQNYFRMYPKLGGMTGTAATEAHEFYQIYKMNVVTIP TNLPVKRIDQDDEFYKNMLDKFAAITQAIREAKERGQPVLVGTVSIEKSELLSEFLTKEKVEHKVLNARYHEQEAHIVAQ AGRLGAVTIATNMAGRGTDIQLGGNLEFRMLDEHPALEIGTPEFDAAAERIRGEIIAEKEAVLAAGGLFVLGTERHESRR IDNQLRGRSGRQGDPGLSRFYLSLDDDLLRIFGPQTMFARMMNKNLADGEAIVSPWISKAIETAQKKVEARNYDIRKQVV EYDDVMNDQRKVIYEQRADIMDAETVDDVVTDMRADTANAIVGGCCPPHSYPEQWDVDTLKLRSAETLGITPPFDEWIEQ DGIDPEILAEKVLAEADAVIAAKRATIDDQSWHGIEKSVLLQTLDHHWKEHLATLDALRQVIHLRAYAQKTPINEYKHEA FALFERMLVAIREEVTRVLAHVRFEMAPQDYAELPPMPDFVTEHVNALTGEDNSGDRDGGTLGIIGSRVPQAIAAPAGDD FEITPEIAATLGRNSLCPCGSGRKYKHCHGAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 4e-105 | 41 |
