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Name : Swit_2601 (Swit_2601) Accession : YP_001263097.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 2882412 - 2884379 bp Length : 1968 bp Strand : + Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region DNA sequence : ATGACGATTGCATCGAGGCAGCTCGCCAATGCCATTCGCGCGCTTGCGATGGACGCGGTGCAGGCCGCCAATTCGGGCCA CCCCGGCATGCCGATGGGCATGGCCGACGTCGCGACCGAGCTGTTCACGAAGCATCTGAAATATGATCCGGCCCAGCCCA GATGGGCGGACCGCGACCGCTTCGTCCTGTCGGCGGGCCACGGATCGATGCTGATCTACGCGCTGCTCCACCTGACCGGC TATGCGCGCCCGACGATCGAGGATATCCGCAACTTCCGCCAGCTCCACAGCCCGTGCGCCGGCCACCCCGAGAATTTCGA GCTGGCGGGCGTCGAGGCGACCACCGGCCCGCTCGGCTCGGGCCTCGCCACCGCGGTCGGCATGGCGATCGCCGAGCGGC ACCTGAACGCGAGCTTCGGCACCGACCTGGTCGACCATCATACCTGGGTGATCGCCGGCGATGGCTGCCTGATGGAAGGC ATCAACCATGAGGCGATCGGCCTGGCCGGCCATCTGAAGCTCGGCCGCCTGATCGTGCTGTGGGACGACAACAGGATCAC CATCGACGGCGCGGTCTCGCTCAGCTCGTCGGAGGACGTGCTCGCCCGCTACGCCGCCACCGGCTGGCACACCGTGTCGT GCGACGGCCATGACCCCGACAGCATCAACACGGCGCTGGAGGCGGCCAAGGCCGATCCGCGCCCGTCGATCGTCCAGTGC ACCACCGTGATCGGCTATGGCGCGCCGAACAAGCAGGGCACCTCGGCCACCCATGGCGCCGCGCTCGGCGTCGATGAGGT CGCGGCGGCGCGCGGCTATCTCGGCTGGACCGCCGAGCCGTTCGTCATCCCCGAGGACATCAAGGCCGCCTGGGCCGAGG CCGGCCATCGCGGCACCGCGACGCGCAGCGCCTGGGAAGCGCGCCTCGTCGCCTCGAAGGACCGCGCCGAGTTCGAGCGC CGCATGGCGGGCGCGCTGCCGGCCGGCTTCTCGCTCGACGCCTATATCAAGGAACTCGCCGCCAACCCGCAGAAGGTGGC GACCCGCAAGGCGTCCGAGATGGCGCTGGGCCCGATCAACGAGCAGCTTCCCGAGACGGTCGGCGGCTCGGCCGACCTGA CCGGATCGAACAACACCAAGACCAAGGGCCAGGCGCCGCTGACCGCCGAGGACTATGCGGGCCGCTATATCTATTACGGC ATCCGCGAGTTCGGCATGGGCTGCGCGATGAACGGCCTCGCCCTGCACGGCGGCGTCATCCCCTATGGCGGCACCTTCAT GGTCTTCTCCGACTATTGCCGCCCGGCGATCCGCCTGTCGGCGCTGCAGCAGCAGCGCGTCGTCTATGTCATGACGCATG ATTCGATCGGCCTGGGCGAGGATGGCCCGACCCACCAGCCGGTCGAGCATCTGATGAGCCTGCGCGCGATGCCGAACCTC GACGTCTATCGCCCGTGCGACGCGATCGAGACCGCCGAATGCTGGCAGCTCGCGCTGGAGAAGGCCGACGGCCCGTCGCT GCTGGCGCTGTCGCGCGAGGGCCTGCCGCAGGTCCGCACCGACATCAGCGAGAATTTCTCGGCGAAGGGCGCCTATCGGC TGAAGGCGGCCGAGGCCACGCGCAAGGTGGTGCTGATCGCCAGCGGCTCCGAGGTCGAGATCGCGCTCGCCACCGCGAAG AAGCTCGAAGAAGCCGGCCATGGCGCCGATGTCGTCTCGATGCCGAGCTGGGAGCGCTTCGACGCGCAGCCCGAAAGCTA TCGCGACGCGATCCTGCCCGAGGGCGTGTTGCTCGTCTCGATCGAGGCCGGCACGACGATGGGCTGGGAACGCTATGTCG GCCGCAAGGGCCTGCGCTTCGGCGTCGACGGCTTCGGCGCCTCGGCCCCGGTCAAGGCGCTCTACGATCATTTCGGCCTG ACGGCCGACAAGCTCGCCCCGCGGATCATCGGGGCGCTCGCCAACTAA Protein sequence : MTIASRQLANAIRALAMDAVQAANSGHPGMPMGMADVATELFTKHLKYDPAQPRWADRDRFVLSAGHGSMLIYALLHLTG YARPTIEDIRNFRQLHSPCAGHPENFELAGVEATTGPLGSGLATAVGMAIAERHLNASFGTDLVDHHTWVIAGDGCLMEG INHEAIGLAGHLKLGRLIVLWDDNRITIDGAVSLSSSEDVLARYAATGWHTVSCDGHDPDSINTALEAAKADPRPSIVQC TTVIGYGAPNKQGTSATHGAALGVDEVAAARGYLGWTAEPFVIPEDIKAAWAEAGHRGTATRSAWEARLVASKDRAEFER RMAGALPAGFSLDAYIKELAANPQKVATRKASEMALGPINEQLPETVGGSADLTGSNNTKTKGQAPLTAEDYAGRYIYYG IREFGMGCAMNGLALHGGVIPYGGTFMVFSDYCRPAIRLSALQQQRVVYVMTHDSIGLGEDGPTHQPVEHLMSLRAMPNL DVYRPCDAIETAECWQLALEKADGPSLLALSREGLPQVRTDISENFSAKGAYRLKAAEATRKVVLIASGSEVEIALATAK KLEEAGHGADVVSMPSWERFDAQPESYRDAILPEGVLLVSIEAGTTMGWERYVGRKGLRFGVDGFGASAPVKALYDHFGL TADKLAPRIIGALAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-150 | 51 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 6e-155 | 51 |
