Gene Information

Name : Swit_2587 (Swit_2587)
Accession : YP_001263083.1
Strain : Sphingomonas wittichii RW1
Genome accession: NC_009511
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2870860 - 2871345 bp
Length : 486 bp
Strand : +
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G

DNA sequence : 
ATGATCATAGTTTCGCAACATTTTCATGACGAGCCCGAACATGACGGCCGGCGCGCCCCTTCGGATGGCGAGGCTGGCCT
GACCCTGATCGAGATGATCGTCGTGCTGGCGATCATCGCGCTGGTCGCGGCGCTGATCGTCCCCAACGTCATCGGCCGTC
CCGATGAAGCGCGCGTGACGGTCGCCAAGACCGACCTGCGCACCATCTCCGCCGCGCTGAAGATGTATCGCCTCGACAAT
GGCGACTATCCGACCACCGAGCAGGGGCTGGCGGCATTGTCGAGGAAGCCGGCCACCGCGCCCGAGCCGCGCAACTGGTC
GGCCGAGGGCTATCTGGCGCAGGTGCCGGTCGACCCCTGGGGCCGCCCCTATGTCTATCGCAATCCCGGCAGCGGCGGCG
CGGGCTTCGACCTGGTCAGCCTGGGCAAGGACGGCAAGCCCGGCGGCGAGGGGCTCGACGCCGACCTGAGCGACAAAGCG
CCCTGA

Protein sequence : 
MIIVSQHFHDEPEHDGRRAPSDGEAGLTLIEMIVVLAIIALVAALIVPNVIGRPDEARVTVAKTDLRTISAALKMYRLDN
GDYPTTEQGLAALSRKPATAPEPRNWSAEGYLAQVPVDPWGRPYVYRNPGSGGAGFDLVSLGKDGKPGGEGLDADLSDKA
P

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 8e-19 48
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-19 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swit_2587 YP_001263083.1 general secretion pathway protein G VFG0180 Protein 4e-31 54
Swit_2587 YP_001263083.1 general secretion pathway protein G VFG1871 Protein 6e-23 48
Swit_2587 YP_001263083.1 general secretion pathway protein G VFG2050 Protein 2e-19 47