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Name : Swit_2583 (Swit_2583) Accession : YP_001263079.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Virulence Product : type II secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 2866447 - 2867667 bp Length : 1221 bp Strand : - Note : PFAM: type II secretion system protein DNA sequence : ATGCCGGCCTTCGCCTATCGCGCGGTCGACATACGGGGCGCCGCGAAGCAGGGGGTGATCGAGGCGTCGAGCCCCGCCGC CGCGCGCCAGCTGCTTCGCGACCGCGAGCTGCTGCCGACCGCGGTCGAGGCGGCGACGGCGGGCGGCGCGGCGCCCGGCA TCGGCGCGCGGCTGTTCCGCCGCAGGGTCGGCGCCCGCGCGCTCGCCACCGTCACCCGCCAGATCGCGACGCTGGTGACG AGCGAGGTCAATATCGAGCAGGCGCTCAAGCTCGTCGCCGAGCAGGCCGAGGGCGCGGCGCTCCGCTCGCTGCTGCTCGA CGTGCGCGGCGCGATCCTCGACGGCTACAGCTTCGCCGCCGCGCTGCGCCTGCACCCGGCGACCTTTCCGGAATTCTACA CCGCCTCGGTCGCGGCGGGCGAGCAGGCGGGGCGGCTGGCGCAGGTGCTCGCCCATCTCGCCGACTTCGTCGAGAACCGG CAGCGCAACCAGCAGAAGATCCAGCTCGCCCTGCTCTATCCGGCGCTGCTCGCGGTCGTCTCGTTCGGGATGATGGCGCT GCTGATGGTCTATGTCGTGCCCGACATCGTCCGCGTCTTCATCTCGCGCGGGGCGGAGCTGCCCTTCCTCACCCGCGCGC TGATCGCGATCTCGGGCGGCTTGCAGAAATATGGGCTGGCGATGGCGATCGCGCTGCTCGGCGCGATCCTGATCGGCGGG CGCTGGCTGCGCGTGCCGGCCAACCGGTTGCGCTTCGACCGGCGGATCGCCACGACCTGGCCGGTCGCGCGGTTCAGTCG CCAGTACAACGCCGCGCGCTTCGCGGCGAGCCTCGCCACCCTCGTCCAGAGCGCGGTGCCGCTGGTCGACGCCCTCAACG CCGCCGCCGCCGTCACCCCCAACCGCTATGTCCGCGAGGCGGCGATCGGCGTCGCGACGCGGGTGCGCGAGGGGGCGAGC CTGCAGGCGGCGATGGGCGAATCGGGCATCTTCCCGCCGATGCTGGTCGCGATCGTCGCCAGCGGCGAGAATGGCGGCCA GCTCGGCCCCGCCCTCGCCCGCGCCGCCGCCGAGCTGGAGCGCGAGATGGAGGCGATGGCGGCGCTGCTCGTCTCGCTGG TCGAGCCGCTGGTGCTGCTGATGATGGGCGGGCTGGTGCTGCTGATGGTGCTGGCGATCCTGCTGCCGATCATCAACCTC AACAATATCGTGGGGATGTGA Protein sequence : MPAFAYRAVDIRGAAKQGVIEASSPAAARQLLRDRELLPTAVEAATAGGAAPGIGARLFRRRVGARALATVTRQIATLVT SEVNIEQALKLVAEQAEGAALRSLLLDVRGAILDGYSFAAALRLHPATFPEFYTASVAAGEQAGRLAQVLAHLADFVENR QRNQQKIQLALLYPALLAVVSFGMMALLMVYVVPDIVRVFISRGAELPFLTRALIAISGGLQKYGLAMAIALLGAILIGG RWLRVPANRLRFDRRIATTWPVARFSRQYNAARFAASLATLVQSAVPLVDALNAAAAVTPNRYVREAAIGVATRVREGAS LQAAMGESGIFPPMLVAIVASGENGGQLGPALARAAAELEREMEAMAALLVSLVEPLVLLMMGGLVLLMVLAILLPIINL NNIVGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-42 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-43 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swit_2583 | YP_001263079.1 | type II secretion system protein | VFG0181 | Protein | 1e-55 | 44 |
| Swit_2583 | YP_001263079.1 | type II secretion system protein | VFG2049 | Protein | 5e-43 | 42 |
