Gene Information

Name : Swit_2562 (Swit_2562)
Accession : YP_001263058.1
Strain : Sphingomonas wittichii RW1
Genome accession: NC_009511
Putative virulence/resistance : Unknown
Product : transcription antitermination protein nusG
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 2843831 - 2844370 bp
Length : 540 bp
Strand : +
Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein

DNA sequence : 
ATGGCGCGCTGGTACATCATTCACGCCTATTCGGGCTTCGAGAACAAGGTCCGGGAAGCGATCCTGGCCGATGCCGCGCG
CCTGGGCCTGGAGCAGCTCGTCGAGGCCGTCGAGGTCCCCACCGAGAAGGTCACCGAAGTCCGGCGCGGCAAGAAGATCA
CGTCGGACCGCAAATTCTTCCCCGGCTATGTGCTGGCGAAGCTCAGCATGAACGACGACGTCTACCACCTGGTGAAGAAC
ACGCCGAAGGTGACGGGCTTCCTCGGTTCGTCGGGCAAGCCGCAGCCGATCAGCGAGGCCGAGGCCGCGCGCATCCTCAA
CACCAAGGAGGAGGCCGCCGCCGCCGCGCCCAAGACCAAGCTCAAGGTCGATTACGAGATCGGCGACCAGGTCAAGGTGC
TCGACGGTCCGTTCGCCAGCTTCAACGGCGTCGTCGAGGAGCTCGACTTCGACCGCAGCCGCGTCAAGGTGTCGGTGTCG
ATCTTCGGCCGCGCGACCCCGGTCGAGCTCGAGTTCGAGCAGGTCGAGCGAGTCAAGTGA

Protein sequence : 
MARWYIIHAYSGFENKVREAILADAARLGLEQLVEAVEVPTEKVTEVRRGKKITSDRKFFPGYVLAKLSMNDDVYHLVKN
TPKVTGFLGSSGKPQPISEAEAARILNTKEEAAAAAPKTKLKVDYEIGDQVKVLDGPFASFNGVVEELDFDRSRVKVSVS
IFGRATPVELEFEQVERVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 4e-38 48
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 4e-38 48