Gene Information

Name : Swit_1917 (Swit_1917)
Accession : YP_001262415.1
Strain : Sphingomonas wittichii RW1
Genome accession: NC_009511
Putative virulence/resistance : Unknown
Product : ammonium transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0004
EC number : -
Position : 2150616 - 2151965 bp
Length : 1350 bp
Strand : -
Note : TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter

DNA sequence :
ATGACGCTTCACACCAAGCTGGCGACGGGCTTCGGCGCGCTTGCCGTCACCGCCCTGGCGGCCATGCCCGCCTGGGCGCA
GGAGGCCGCCGCGGCCGCGGCGCCCACCCCGGACAAGGGCGACACCGCCTGGATGATGGTCTCGACCGTCCTCGTCCTGG
CGATGATCCTGCCCGGCCTCGCCCTCTTCTACGGCGGCCTCGTCCGCACGAAGAACATGCTGTCGGTGATGACCCAGATC
GGCGCCGCCGCCGCGCTGGCGATGATCGTCTGGGTGATCTGGGGCTACACCATGGCCTTCGGCCCCGACGCGTCGGACGG
CCTGAAGCCCTATATCTCCAGCTTCGGGAAGCTGTTCCTCGCGGGCATCACCCCCGCCTCGACCGCCGCCACCTTCACCG
ACGGCGTCGTCATCCCCGAATATGTGTTCGTCTGCTTCCAGATGACCTTCGCCGCGATCACGGTCGCGCTGGTGCTGGGA
TCGGTGGTCGAGCGCATCAAGTTTGCGGCGGTGATGATCTTCGCGCTGGTCTGGCTCACCATCGTCTATTTCCCGATCGC
CCACATGGTCTGGGCGGCCGGCGGCCTGTTCTTCGAAATGGGCGCGCTCGATTTCGCGGGCGGCACGGTGGTCCACATCA
ATGCCGGCGTCTCGGCGCTGGTCGCCTGCATCATCCTCGGCAAGCGCATCGGCTACATGAAGGACATCATGGCGCCGCAC
TCGATGACGCTGACCTTCGTCGGCACCGGCCTGCTGTGGGTGGGCTGGTTCGGCTTCAACGCCGGCTCGGCGCTCGAAGC
CAACGGCTCGGCGGCGCTCGCGATGATCAACACCTTCGTCGCCACCGCCTCGGCGGGCCTCGCCTGGCTGGTCGTCGAGA
AGCTGTTCGGCCACAAGCCGTCGGCCCTCGGCTTCTGCTCGGGCATCATCGCCGGCCTCGTCGCGGTCACCCCGGCGGCC
GGCAATTCCGGCCCGTTCGGCGCGATCGTGCTTGGCGCCGTCGCCTCGCTGGTCTGCTATCTCGCGGTCGCCAAGATCAA
GCCGGCGCTCGGTTATGACGACTCGCTCGACGCGTTCGGCATCCACGGCATCGGCGGCATGGTCGGCGCGATCGGCACCG
CGATCGTCTACGCCCCGTCGCTCGGCGGGCCCGGCGGCGCCGACTATGCGATCGGCAGCCAGCTCGTCACCCAGGTCCTC
GCCGTGCTGGCGACCATCGTCTGGGCCGCGATCGGCACCACCATCGCCATCTATGTCGCCAAGGCGCTCACCGGCCTCCG
GGTCAGCCGCGAAGCCGAGATCGAGGGTCTCGACCTCTCGGAACATGGCGAGCGCGCCTACAACTACTGA

Protein sequence :
MTLHTKLATGFGALAVTALAAMPAWAQEAAAAAAPTPDKGDTAWMMVSTVLVLAMILPGLALFYGGLVRTKNMLSVMTQI
GAAAALAMIVWVIWGYTMAFGPDASDGLKPYISSFGKLFLAGITPASTAATFTDGVVIPEYVFVCFQMTFAAITVALVLG
SVVERIKFAAVMIFALVWLTIVYFPIAHMVWAAGGLFFEMGALDFAGGTVVHINAGVSALVACIILGKRIGYMKDIMAPH
SMTLTFVGTGLLWVGWFGFNAGSALEANGSAALAMINTFVATASAGLAWLVVEKLFGHKPSALGFCSGIIAGLVAVTPAA
GNSGPFGAIVLGAVASLVCYLAVAKIKPALGYDDSLDAFGIHGIGGMVGAIGTAIVYAPSLGGPGGADYAIGSQLVTQVL
AVLATIVWAAIGTTIAIYVAKALTGLRVSREAEIEGLDLSEHGERAYNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00291 YP_008211617.1 Ammonia permease Not tested AbaR26 Protein 2e-81 50
BJAB07104_00287 YP_008207752.1 Ammonia permease Not tested AbaR25 Protein 2e-81 50