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Name : Swit_1898 (Swit_1898) Accession : YP_001262396.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Resistance Product : SSS family solute/sodium (Na+) symporter Function : - COG functional category : R : General function prediction only COG ID : COG4147 EC number : - Position : 2125235 - 2126779 bp Length : 1545 bp Strand : + Note : TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter DNA sequence : ATGACCGCCATCCATCCCTCCGCCATCCTGATCTTCGCCGCGATCGTCCTGTCGTCGCTCGTCATCACCTATTGGGCGCA TCGGCGCAGCAAGAGCGCCGAGGGCTTCTACGCGGCCGGCGGCAACATCACGCCGATGCAGAACGGGATCGCCATCTCGG GCGACTATCTGTCGGCCGCCTCCTTCCTGGGGACGATCGCGGTCTTCTACGGCATGGGCGACGACGGGCTGATCTACGCG GTCGGGGCGGCGGCCGGCTGGCCGATCGTGCTGTGCCTGGTCGCCGAGCGGCTGCGCAACCTCGGCCGCTACACCTTCTC CGACGTGGTCAGCTACCGGCTCGAGGAGAAGCCGATCCGGCTGTTCACCGCGGTCAGCACCCTGTGCGTCACCGGCGCCT ACCTGATCGCGCAGATGGTCGGCGGCGCGACGCTGATCGCCGCGCTGTTCGGCCTGTCCTACGCCGCCGCCATCGCCTGC TTCGGCGTGCTGATGGTGTTCTACGTGGTGATCGGCGGCATGACCGCGACGACCTGGATCCAGATCATCAAGGCGACGCT GCTCGTCCTGATCGCGCTGGTGATGGTGGCACTGGCGATGCGGCTTTACGGCGGCCCGCTGGCGCTGGTCGACGCGGCGG CCGCCTCCTCGACCGGCCCGACCGGGCATATGCGCGAGTCCGGACTGCTCCCCGACGGCTTCAGCGCGGTGTCGCTGGCG CTGGCCTTCGCGCTCGGCCCGGTCGGCCTGCCGCACATCCTGATGCGCTTCTTCACCGTCCGCGACGGCATCTCGGCGCG CCGCTCGCTGAGCATCGCCGCGCTGATCATCGCCGTCTTCCAGATGCTGATGGTGCTGCTCGGCTATGCCGCCATGGCGC TGCTGTCGGGCGACGCGCGCTTCGCCCAGGCCGACGGCAAGCTGGTCGGCGGCCTCAACATGGCGACCCTCCACCTCGCC GAGGCGCTCGGCGGGCCGACGCTGCTCGGCGCTGTGTCGGCGGTCTCCTTCGCGACGATCCTCGCGGTCGTGGCCGGGCT GACGCTGGCGGCGGCCTCGGCCGTGTCGCGCGACCTTTATCGCCACGTCTTCGCGCGCGGGACGGCCAACGACCAGCGCG AGGTGCGCATCTCGAAGATATCGGCGGCGGTGATCGGCGTGATCTCGGTGGTGCTCGGCCTTGCCTTCGAGCATGAGAAT ATCGGCTTCCTCGCGACGCTGCCGCTGGTCATCGCCGCCAGCGTCAACTGCCCGATCCTGCTGCTCGCGCTCTACTGGAA GGGCCTCACCACGCGCGGCGCGGTGACCGGCGGCACGCTGGGCCTGCTCTTCTCGGTCGTGCCGATCATCCTCAGCAAGA AGGTGTGGGTCGACACGCTGGGCCATCCGGAAGCGATCTTCCCCTATGAATATCCGACCGTCCTCGCGCTCGCGGCGGCG GTCGGCGGGGCGGTGCTGGTCTCGCATTTCGACCGTGGCGCGCGCGCCGACCGCGAGCGCGCCGCCTTCGCCGCGCAGCG ACGCCGCTCGATCGGGCTCGGCTGA Protein sequence : MTAIHPSAILIFAAIVLSSLVITYWAHRRSKSAEGFYAAGGNITPMQNGIAISGDYLSAASFLGTIAVFYGMGDDGLIYA VGAAAGWPIVLCLVAERLRNLGRYTFSDVVSYRLEEKPIRLFTAVSTLCVTGAYLIAQMVGGATLIAALFGLSYAAAIAC FGVLMVFYVVIGGMTATTWIQIIKATLLVLIALVMVALAMRLYGGPLALVDAAAASSTGPTGHMRESGLLPDGFSAVSLA LAFALGPVGLPHILMRFFTVRDGISARRSLSIAALIIAVFQMLMVLLGYAAMALLSGDARFAQADGKLVGGLNMATLHLA EALGGPTLLGAVSAVSFATILAVVAGLTLAAASAVSRDLYRHVFARGTANDQREVRISKISAAVIGVISVVLGLAFEHEN IGFLATLPLVIAASVNCPILLLALYWKGLTTRGAVTGGTLGLLFSVVPIILSKKVWVDTLGHPEAIFPYEYPTVLALAAA VGGAVLVSHFDRGARADRERAAFAAQRRRSIGLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 2e-78 | 47 |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 2e-45 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swit_1898 | YP_001262396.1 | SSS family solute/sodium (Na+) symporter | BAC0564 | Protein | 3e-90 | 53 |
| Swit_1898 | YP_001262396.1 | SSS family solute/sodium (Na+) symporter | BAC0570 | Protein | 1e-80 | 50 |
