|
Name : Swit_1568 (Swit_1568) Accession : YP_001262069.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1743395 - 1744861 bp Length : 1467 bp Strand : + Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase DNA sequence : ATGAAGCTGTTGAACGACAAAGCGCTTTGGCGCGCGGCGGCCTATGTCGACGGGAGCTGGATCGCGCAGGGCGAGCAAGG GTCGCGGCCGTTGTTCAACCCTTCGACCGGCGAACGGCTGGCGGACATTCCGCAGCTCGGCGCCGGACAGACCCGCGAAG CGATCGAGGCCGCCCACGCCGCCCTGCCCGCCTGGCGGGCGAGCACGGCCAAGGAACGCGCCATCATCCTGAGGCGGTGG TTCGACCTGATCGTCGCGAACAGCGACGACCTGGCCCGGATCATCGTCCTGGAGGAAGGAAAACCCTTCGCGGAGGCGAA GGGCGAGATCGCCTATGCGGCATCGTTCGTCGAATGGTTCGCCGAAGAGGCCAAGCGCGTCAAAGGCGACGTGATGGCGG GGACCGAGCCCGGCCGCAGGATCGTCACGCTCAAGGAGCCGATCGGCGTCTGCGCGGCGATCACGCCCTGGAATTTCCCG GCTGCGATGATCACGCGCAAGGCGGCGCCGGCCCTGGGCGCAGGCTGCACGATGGTGGTCAAGCCCGCGGAGCAGACGCC GCTCACGGCCTTCGCCCTGGCCGAACTGGCCGAGCGCGCGGGGGTTCCGGCCGGCGTGCTCAACATCGTGACGGGCCAGG CCCGCACCATCGGCGCCGAGCTGACGGGCAACCCGCTCGTCAGGAAGATCACCTTCACGGGCTCGACCGAGGTCGGTCGC ATCCTGATCGCCCAGTCTGCCGCGACGATCAAGAAGACCTCCATGGAACTGGGCGGAAATGCGCCCTTCCTCGTGTTCGA CGATGCCGATGTGGACCAGGCCGTGGCCGGCCTGATCGCCACGAAGTACCGGAACACGGGCCAGGCCTGCATCAGCGCCA ACCGGATCTATGTCCAGGACGGCATCTACGACGCGTTCGTGGCCGCCCTCGCCTCGGCCGTGGCGCGACTCAAGGTCGGC GACGGGTTCGAGGAAGGCGTGCAGCAAGGCCCCCTGATCGACGACGACGCCGTGACCAAGGTCGAGGCGCATATCGCCGA CGCGGTCGGCAAGGGGGCCAAGGTCGCCCAGGGCGCGCGCCGCCATTCCCGGGGCGGCCTCTTCTTCGAGCCGACCGTCC TCATCGACGTGACGCAGGACATGCTGATCTGCCGGGAGGAGACCTTCGGGCCGGTCGCGCCGGTGGTCCGCTTCTCGGAC GAGGCCGAGGCCATCCGTCTGGCGAACGACACCGAGTTCGGGCTGGCCGCCTATCTCTTCTCGCGCGACGCCGAACGCAT CTGGCGGGTCGCGGCGGCGCTCGAATCGGGAATGGTCGGGATCAACACCGGCGCGATCTCGAACGAGGTGGCGCCCTTCG GCGGCGTCAAGCAGTCGGGCCTCGGCCGCGAGGGTTCGATCTACGGCATCGACGAGTATCTCGAGACCAAATATCTCGCA TGGCACGGTGCCGGCGGCATCGGATAG Protein sequence : MKLLNDKALWRAAAYVDGSWIAQGEQGSRPLFNPSTGERLADIPQLGAGQTREAIEAAHAALPAWRASTAKERAIILRRW FDLIVANSDDLARIIVLEEGKPFAEAKGEIAYAASFVEWFAEEAKRVKGDVMAGTEPGRRIVTLKEPIGVCAAITPWNFP AAMITRKAAPALGAGCTMVVKPAEQTPLTAFALAELAERAGVPAGVLNIVTGQARTIGAELTGNPLVRKITFTGSTEVGR ILIAQSAATIKKTSMELGGNAPFLVFDDADVDQAVAGLIATKYRNTGQACISANRIYVQDGIYDAFVAALASAVARLKVG DGFEEGVQQGPLIDDDAVTKVEAHIADAVGKGAKVAQGARRHSRGGLFFEPTVLIDVTQDMLICREETFGPVAPVVRFSD EAEAIRLANDTEFGLAAYLFSRDAERIWRVAAALESGMVGINTGAISNEVAPFGGVKQSGLGREGSIYGIDEYLETKYLA WHGAGGIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-127 | 62 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-74 | 42 |
